Gene TDE0080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0080 
SymbolgbsA 
ID2741695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp90818 
End bp92302 
Gene Length1485 bp 
Protein Length494 aa 
Translation table11 
GC content40% 
IMG OID637158950 
Productbetaine aldehyde dehydrogenase 
Protein accessionNP_970697 
Protein GI42525599 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACCT TAAAGTATGT TAAGAAAGAG CCTTATCAGC TGTTTATTGA CGGTAAATAT 
ATTCCGTCAG AGAATGGATC TATTGTTGAT GTAATAAACC CTGTCAATAA TTTACCTTTT
GCTAAGGCCT ATCGAGGTAC AAAAACTGAT TGCGAAAAAG CAATTGCTGC AGCAAGAAAA
GCCTTTGATG AAGGTCCTTA CAGAAAAATG TCTGCAAAAG ATCGTAGTAA ATTATTATTG
AAGGCTGCCC AAATTCTTGA ACGGCGTGCT GAAGAGCTTG CAGTTATTGA AACGCTTGAA
TGCGGTAAAA ATTATAGTGC ATGCCGCTAT TGGGAAGTGC CTATGGCCAT TGATTCATTT
GAATTCTTTG CAGGAAAGGC AAGGTGTTTG GATGGTAAAG TGGTGCCGAG TGAATATGGA
ACTCTTAATT ATGTAACATG GAATCCTTGC GGAGTAGTAG GAGAGATTCT TCCATGGAAC
GGCCCATTTC TTATGGGATG TCAAAAAGTA AATGCAATTT TAGCAGCCGG TAATACCGTT
GTAATTAAAC CGCCAAGTTG GGGTGTGTTG TCAATGATTC TTATGGCAAG TATTTATGAA
GAAGCCGGTT TTCCTTCCGG TGTCGTTAAT GTAGTGACCG GCTCAGGTGC TGAAGTAGGA
AACTGTCTAG TTGAGAGTGA GCTTGTGGAT ATGGTATCGA TGACAGGCGG GGTAGAGACA
GGCCGTGAGA TAATTGCGCA TTCTGCAAAA TTGGTAAAAG ATATTGCCCT AGAACTGGGC
GGTAAAAGTC CTAACATCTT TTTTGAAGAT GTTGATATTG AGCAAGCAGC GCGTTTTGCC
GTGTATGGTT TTACTAATCA TGCGGGTCAA ATATGCGTAT CAGGGACGAG GATTTTAGTA
CAACGCCGTA TATATGAACC CTTTATCAAA GCTATGGTTG AGACTGCTTA TAAATTAAAG
CCGGGAGATG GGTTTGATCC GTCTACAACC ATAAATACCC TAATATCCAG AGAACATGCC
AATACGGTAT GGGAATACAT TGAAAAAGGG AAAAAACAAA ATGCAAGATT GGTTTGCGGC
GGAAATCCAT ATTCGGAACC TCTCTTAAAG AAAGGTAATT TTATTCCGCC AACTATTTTT
GCAGATGTTA CACCTGAAAT GGAGATATTC CAAAATGAGA TATTTGGTCC TGTTGCTTGT
ATTACACCTT TTGACACAGA AGAAGAGGCC ATTTCTTTGG CAAATGCAAC TAAATATGGC
CTAGCCGGAG GAGTATTTAC AAAAGATATA AAGAGGGCGA TTCGTGTGGC AGACAGAATA
AATAGCGGTC AGATTTATAT AAATAATTAT TTTAGTAAAG GCATGATTGA ATCACCCGGT
ACCGGATGGA AAGAAAGCGG GATAGGGATA GCAGGTATAC ATAAATATAT GATTTCAAAA
ACCGTATTTG TTGAAACCGT TGATAATGTG TTGCTTCCTA TTTGA
 
Protein sequence
METLKYVKKE PYQLFIDGKY IPSENGSIVD VINPVNNLPF AKAYRGTKTD CEKAIAAARK 
AFDEGPYRKM SAKDRSKLLL KAAQILERRA EELAVIETLE CGKNYSACRY WEVPMAIDSF
EFFAGKARCL DGKVVPSEYG TLNYVTWNPC GVVGEILPWN GPFLMGCQKV NAILAAGNTV
VIKPPSWGVL SMILMASIYE EAGFPSGVVN VVTGSGAEVG NCLVESELVD MVSMTGGVET
GREIIAHSAK LVKDIALELG GKSPNIFFED VDIEQAARFA VYGFTNHAGQ ICVSGTRILV
QRRIYEPFIK AMVETAYKLK PGDGFDPSTT INTLISREHA NTVWEYIEKG KKQNARLVCG
GNPYSEPLLK KGNFIPPTIF ADVTPEMEIF QNEIFGPVAC ITPFDTEEEA ISLANATKYG
LAGGVFTKDI KRAIRVADRI NSGQIYINNY FSKGMIESPG TGWKESGIGI AGIHKYMISK
TVFVETVDNV LLPI