| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0016 |
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| Symbol | |
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| ID | 2741631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 20597 |
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| End bp | 21922 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637158885 |
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| Product | recombination factor protein RarA |
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| Protein accession | NP_970633 |
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| Protein GI | 42525535 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.901386 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTAAGG ATCTTTTTGA AGCTGCGGCT TCAAGTTCTA AACAAAATGA ACCTCTTGCC
TCCCGCATGA GGCCTATCAG CTTGGACGAA TATATAGGCC AAGAACATAT AATCGGAAAA
GGCTGCCTTT TAAGGCGTGC AATCCAAGCC GATAGACTTT CTTCACTTAT TTTTTTCGGC
CCTCCCGGAA CAGGAAAAAC CACCCTTGCC AGAGTTATCG CAAATACCAC TAAAAGCAAT
TTTTTAAGTT TAAATGCCGT TTTAGCCGGT GTGCAGCAGA TAAGGGAAGC CGTAACCAAT
GCTGAGGAAA ACAAAAAGCT CTATAACCGT AAGACTATTC TTTTTGTGGA CGAAGTTCAC
CGCTGGAATA AATCCCAACA GGATGCCCTC CTGCCATGGG TAGAAAACGG GACGATAATT
TTAATCGGTG CTACGACGGA AAACCCTTAT TTTGAGGTGA ACAAGGCTCT TGTGAGCCGC
AGCCGCGTTT TTGAATTAAA ACCTTTAACC GATAATGACC TAAAAAAAGT TGCACAGTTT
GCTTTGACAA ATAAAGAAAG GGGTTACGGT AACTGGAAAA TAGAGTTTGA GGCCGGTGCC
TTGGAGCATC TTATCGATAC GGCATCCGGC GATGCGCGAA GTCTCTTAAA TGCCCTTGAA
CTTGCCGTTG AAACGAGTGC GGAGCACTGG CCTCCTGAAG AAAATTTTAA AATTACGATT
AGTCTAAAGG CAGCCGAAGA AAGTATCCAA AAGAAGGTTG TCTTATACGA TAGGGACGGC
GACTATCATT ATGATGTTAT AAGCGCCTTT ATAAAATCTA TCAGAGGGAG CGATCCTGAT
GCCGCCGTGT ACTGGCTTGC CAGAATGATA GCGGCAGGAG AAGACCCGCG CTTTATCTTC
CGGCGAATGT TAATTTCAGC ATGTGAAGAT ATAGGGCTTG CATCCCCCGG GGCTGTAAGC
GTTGTTGCAG GTGCGGCTGA GGCCTTTGAC AGGGTCGGTA TGCCTGAAGG CAGGTATCAT
CTTGCCCATG CTGCCCTCTA TTTGGCAACC TGCCCCAAAT CAAACAGTGC TGAAGCTTTT
TTTAAAGCCC TAGATTGTGT TCAAAAGGAA AATAAAGAAG TTCCTAACCA CTTAAAAGAT
TCAAATCGTG ACGGAGAAGC TTTAGGCCAT GGTGAAGGCT ATCTTTATCC CCATGCCTTT
GAGGGACACT GGGTAAAACA GCAATATCTT CCGGATGGGC TTGAGGGCAC TCATTTTTAT
GAGCCGAGCA ATCAAGGCTA TGAGGGCAAG ATAAAGCCTG AAATTTTAAA AAAGCGGCAA
AGCTAA
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| Protein sequence | MSKDLFEAAA SSSKQNEPLA SRMRPISLDE YIGQEHIIGK GCLLRRAIQA DRLSSLIFFG
PPGTGKTTLA RVIANTTKSN FLSLNAVLAG VQQIREAVTN AEENKKLYNR KTILFVDEVH
RWNKSQQDAL LPWVENGTII LIGATTENPY FEVNKALVSR SRVFELKPLT DNDLKKVAQF
ALTNKERGYG NWKIEFEAGA LEHLIDTASG DARSLLNALE LAVETSAEHW PPEENFKITI
SLKAAEESIQ KKVVLYDRDG DYHYDVISAF IKSIRGSDPD AAVYWLARMI AAGEDPRFIF
RRMLISACED IGLASPGAVS VVAGAAEAFD RVGMPEGRYH LAHAALYLAT CPKSNSAEAF
FKALDCVQKE NKEVPNHLKD SNRDGEALGH GEGYLYPHAF EGHWVKQQYL PDGLEGTHFY
EPSNQGYEGK IKPEILKKRQ S
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