Gene TDE0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0004 
Symbol 
ID2741618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand+ 
Start bp4383 
End bp5057 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content42% 
IMG OID637158873 
Producthypothetical protein 
Protein accessionNP_970621 
Protein GI42525523 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGATA CACAAATAGA ATTCGGTTCA TATGAAAAAA GCATACATAG GTGGGGAAGA 
ACATGGATGG TAATAGCCAT TATAATGTTT CTTTCTTATC CTCTTTTTAC CTGTATTTAC 
TATAACACTT GGCCCAATTT TTGGCTCCTT TTAAGGGGAC TTTTCGGTGT TGCCGTTGTT 
TTTTGGCCGG TAGGAATTAT TGAAGCTTTT ACCTTCGCCC CCATGCTCGG TGCGGGCGGA 
ACCTATGTAG GCTTTATCAC AGGAAACTTG ACAAACCTAA AAGTGCCCTG CGGAGTCTTG 
GCTTTGGAGA CGGCAAAGGT TGAAGCCAAT ACCGAAGAAG GAGATGTAGT TACCACAATA 
GCCGTCGCAG TTTCTTCCAT TACTACAACC CTTATCTTGG TTTTGGGAAT GCTCTTATTG 
ACTCAGTTAA AACCAATATT GGAATCACCC ATCATGGCCC CGGCCTTTAA AAATATCTTG 
CCGGCCCTTT TTGGCGGCCT TCTGGTAGTC TTTGTTGCAA AAAATCCTAA GATTGCCGCA 
GTTCCCTTTG CCTTTATGCT GATTCTTTTT ATTGCAATGC CCCAGCTTGG AAAGGCCATA 
AGTATGCTAA TTCCCGTCGG GGCCGCAATT ACAATCATCT ACACAAGGAT AATGTATAAG 
AAAGGAAAAA TTTAA
 
Protein sequence
MQDTQIEFGS YEKSIHRWGR TWMVIAIIMF LSYPLFTCIY YNTWPNFWLL LRGLFGVAVV 
FWPVGIIEAF TFAPMLGAGG TYVGFITGNL TNLKVPCGVL ALETAKVEAN TEEGDVVTTI 
AVAVSSITTT LILVLGMLLL TQLKPILESP IMAPAFKNIL PALFGGLLVV FVAKNPKIAA 
VPFAFMLILF IAMPQLGKAI SMLIPVGAAI TIIYTRIMYK KGKI