Gene TC0898 details

Gene Information

• Locus tag: TC0898
• Symbol: pcrA
• ID: 1246267
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlamydia muridarum Nigg
• Kingdom: Bacteria
• Replicon accession: NC_002620
• Strand: +
• Start bp: 1040188
• End bp: 1042092
• Gene Length: 1905 bp
• Protein Length: 634 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 637061712
• Product: ATP-dependent helicase PcrA
• Protein accession: NP_297271
• Protein GI: 15835512
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0210] Superfamily I DNA and RNA helicases

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTACAT CCGAATTAAA TGCAGCACAA GTTACCGCCG TCACTGCGCC ATTACAACCA 
GTCCTTGTTT TAGCTGGAGC TGGAGCTGGA AAAACTCGAG TGGTTTCCCA TCGAATTCTT 
TACCTAATCG AAGAGGCTCA ACTCGATCCA TCGCAAATTT TAGCAATAAC ATTCACTAAC 
AAAGCTGCAA AAGAATTAAA CGAACGAGTC CTAACTCAAT GCAACTTTCC AGACTATCGA 
GGCATACCTA TGGTGAGCAC CTTTCATAGC TTAGGTGTTT ATATTCTTCG CCGATCAATC 
CAACTCCTAG ATAGACAATC AAATTTTGCT ATTTATGATC AAAGCGATTC TGAAAAATTA 
ATCAAGCAGT GCTTACGTAA ACTCAATCTC GATAATAAAC TTTGCAATGC AATGCAGTTT 
ACTATCTCTC AAGCAAAAAA TCGTCTACAA GATCCAGAAG ATCTAGATTC TAGAGAATAT 
CCAGATCCTG CCCGTGCAGT TTATACTGAA TACCAAGAAC AGTTACGCGC TGCGAATGCT 
CTGGACTTTG ATGATCTCTT ATTTTTGACA GAAAAATTAC TCCGCATCCC CGAAATCCAA 
CAGGAATATT CCAACCTCTG GAAAGCCTTA TTAATAGATG AGTATCAAGA CACTAATCAT 
GCGCAATACC TCATCGCTAA ACGTCTTGCA GCCTCTCACA ACAATATTTT TGTCGTTGGA 
GATCCAGATC AATCCATATA TTCCTGGCGA GGTGCTAACA TCTCTAATAT TTTAAATTTT 
GAACAAGATT ATCCAAAGGC TTTGGTCGTT CGTCTGGAAG AAAATTACCG TTCCTGCGGA 
ACTATTTTAG AGGCAGCAAA TGCTCTCATT CAAAATAATT CTGCTCGTTT AGATAAAACT 
TTGCGTAGTG TGAAAGGCCC TGGAGATAAA ATTTTCTGTT TCACAGGGAA AAATGACCGC 
GACGAAGCGG AACAAGTATT AGAAGAAATT TCCAATCTTC ACTCATACAA AGATATTCCT 
CTCTCTCATA TCTGCATTTT GTATCGAACA AATTTTCAAT CGCAATCATT CGAAGCAGCT 
CTTCTCAAGC GTGGTTATCC CTATGAAATT ATAGGAGGCA TTTCCTTCTA CAAACGCAAA 
GAAATCCAAG ATATTCTCGC TTTCTTGCGT CTCTTTTCTA ACAACTACGA TATGGCCGCT 
TTTGAGCGCA CTATCGGACT TAAGAAATGC GGTATTGGCG CTACCACCCT ATCGTCTCTC 
ATGAGTTATG CGAAAAGTAT GGACCTTCCT ATCCTGCAAG CATGCTGGGA TGTCCTAGAG 
AAAAAACCCA TCCGTTTAAC AAAAAAACAA CAACAGGGGC TTTTCTCTTA TCTTACGCAT 
TTCCATCAGA TGGAAAAACT TTATGGAAAC TGCGATCTTC ATGAATTTAT TAATGAGACT 
ATTCGCATTA CGGATTACCT CGCCATTCTC AAAGAGGACC CAGAAACTTA TGACGATAGA 
AAGAATAACC TAGAACAGTT ACTAGCAGAA ACACAAATAT GGGGCAAAAG CAGTGAGAAC 
CTCCCGAACT TTTTAGAAGA TTTAGCTCTA AAAAGTTCAG CAGATGAAAC TGCAAGTTCT 
CATGATCGTC TTAAACTCAT GACCATCCAC AATAGCAAGG GGTTAGAATT TCCTGTAGTC 
TTCTTAGTTG GACTCGAAGA AAACCTACTC CCTCATGCAA ATTCCAAAGG CATGCACGAA 
AATATTGAAG AGGAACGAAG ATTATGTTAC GTGGGAATTA CCCGAGCACA AGAGTACCTC 
TACTTATCTC GAGCAAAAAC CCGATTCCTT TGGGGGACGG AACGCACCAT GGTCCCAAGC 
AGATTTATTA GCGAGCTGCC TAGGGCTCTT TTAAAATTTG TTTAA 

 

Protein sequence

MLTSELNAAQ VTAVTAPLQP VLVLAGAGAG KTRVVSHRIL YLIEEAQLDP SQILAITFTN 
KAAKELNERV LTQCNFPDYR GIPMVSTFHS LGVYILRRSI QLLDRQSNFA IYDQSDSEKL 
IKQCLRKLNL DNKLCNAMQF TISQAKNRLQ DPEDLDSREY PDPARAVYTE YQEQLRAANA 
LDFDDLLFLT EKLLRIPEIQ QEYSNLWKAL LIDEYQDTNH AQYLIAKRLA ASHNNIFVVG 
DPDQSIYSWR GANISNILNF EQDYPKALVV RLEENYRSCG TILEAANALI QNNSARLDKT 
LRSVKGPGDK IFCFTGKNDR DEAEQVLEEI SNLHSYKDIP LSHICILYRT NFQSQSFEAA 
LLKRGYPYEI IGGISFYKRK EIQDILAFLR LFSNNYDMAA FERTIGLKKC GIGATTLSSL 
MSYAKSMDLP ILQACWDVLE KKPIRLTKKQ QQGLFSYLTH FHQMEKLYGN CDLHEFINET 
IRITDYLAIL KEDPETYDDR KNNLEQLLAE TQIWGKSSEN LPNFLEDLAL KSSADETASS 
HDRLKLMTIH NSKGLEFPVV FLVGLEENLL PHANSKGMHE NIEEERRLCY VGITRAQEYL 
YLSRAKTRFL WGTERTMVPS RFISELPRAL LKFV