Gene TC0514 details

Gene Information

• Locus tag: TC0514
• Symbol: lpxD
• ID: 1245874
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlamydia muridarum Nigg
• Kingdom: Bacteria
• Replicon accession: NC_002620
• Strand: +
• Start bp: 621234
• End bp: 622298
• Gene Length: 1065 bp
• Protein Length: 354 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 637061320
• Product: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
• Protein accession: NP_296891
• Protein GI: 15835132
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
• TIGRFAM ID: [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.958084
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTCAAC CCGTTTATTC TCTTAAACAA TTAGCTGATT TTTTAAATGT CGAGTTTCAA 
GGAAATGGAG CCACACTTCT TTCCGGTGTT GAGGAGATAG GAGAAGCAAA AGCGGCACAC 
GTTACTTTCT TGGACAATGA AAAATATGCT AAACATTTAA AATCATCTGA AGCTGGCGCC 
ATCATTCTTT CTCGAACGCA GTTTCAAAAA TATCGAGAAT TGAACAAAAA TTTCCTTATA 
GTTTCAGAAT CCCCCTCCCT AGTTTTCCAA AAATGCTTAG AACTATTCAT AGCTCCTGTC 
GACTCTGGAT TTCCAGGCAT TCATCCTACT GCAGTTATTC ATCCAACAGC AATTATTGAA 
GAACATGTGT GTATCGAGCC TTATGTTGTG ATTTGTCAAC ATGCTCGTAT TGGAGCGGCT 
TGTCATATTG GAACAGGAAG TGTCATCGGA GCCCATTCTT CTATTGGAGA ACATTCTTAT 
ATTTATCCTC GCGTTGTTGT TAGAGAAAGG GTTTCTATCG GCAAACGCGT TATCATCCAA 
CCGGGAGCAA TCATAGGGTC TTGCGGGTTC GGTTATGTTA CCAGTGCTTT TGGGCAGCAC 
AAACATTTGA AGCACCTAGG AACAGTAATC ATTGAAGATG ATGTAGAGAT CGGTGCTAAC 
ACGACTATTG ATAGAGGAAG ATTTAAGCAT AGCATTGTAC GTGAAGGCTC TAAAATTGAT 
AATCTTGTAC AAATCGCACA TCAAGTCGAG GTTGGTCAGC ACAGTATGGT AGTAGCGCAG 
GCTGGGATTG CAGGGTCAAC TAAGATAGGC AACCACGTGA TTATCGGCGG ACAAGCTGGT 
GTAACAGGAC ATATTTGCAT TGCTGATCAT GTTATCATGA TGGCGCAAAC TGGTGTCACA 
AAATCCATTA CCTCTCCAGG GATCTATGGA GGAGCTCCCG CTCGTCCATA TCAAGAGGTT 
CATCGTCAAG TCGCCAAAAT ACGCAATCTT CCTCGCCTTG AGGAGCGTAT CGCATCGCTT 
GAAAAATTGG TACAGAAGCT AGAAGCTCTT TCTGAACAAC ATTAA 

 

Protein sequence

MSQPVYSLKQ LADFLNVEFQ GNGATLLSGV EEIGEAKAAH VTFLDNEKYA KHLKSSEAGA 
IILSRTQFQK YRELNKNFLI VSESPSLVFQ KCLELFIAPV DSGFPGIHPT AVIHPTAIIE 
EHVCIEPYVV ICQHARIGAA CHIGTGSVIG AHSSIGEHSY IYPRVVVRER VSIGKRVIIQ 
PGAIIGSCGF GYVTSAFGQH KHLKHLGTVI IEDDVEIGAN TTIDRGRFKH SIVREGSKID 
NLVQIAHQVE VGQHSMVVAQ AGIAGSTKIG NHVIIGGQAG VTGHICIADH VIMMAQTGVT 
KSITSPGIYG GAPARPYQEV HRQVAKIRNL PRLEERIASL EKLVQKLEAL SEQH