Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TC0302 |
Symbol | recD |
ID | 1246472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlamydia muridarum Nigg |
Kingdom | Bacteria |
Replicon accession | NC_002620 |
Strand | - |
Start bp | 358649 |
End bp | 360883 |
Gene Length | 2235 bp |
Protein Length | 744 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637061102 |
Product | exodeoxyribonuclease V, alpha subunit |
Protein accession | NP_296681 |
Protein GI | 15834922 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTTGCG AAGAGAAACT TTCCGGTACT TTGGAACTTA TTCTTCCAGA AGATTCCCTA TCCAATCAAA TGGGATATGC TTTCCTACGA GTCCCTTACA AAAATTCATT AGTGACCATT TGTGGAAATT CCTCTCTTTC TCTCTTTAAA ATTGGAGCTT CTGTTGATTT AACAGGTTAT TGGAGTGTGG ACGCTAGCGG AGCTTTAGTT TTTCGCTTTA CTACAGCCAA AACGTACAGT CCTTCTTTGG GAATCATAGC CTACCTTACT TCCCAAATCA AAGGCGTGGG TCCCAAACTT GCTCAGAAAA TTATAGCAAC CTTTGGAGAA GAAACTCTTT CTGTGCTTGA TTCATGTCCC TCCAAACTTG TAGAAGTAGA TGGAATCTCT CTTGCCCGCT GTGAGGATTT TTCTAGGCAA CTCCACGAGC AAAAAGACCT ACGTAATGCC CTACTATTTC TGCAACGACA TGGAATTGCT ATTCACTATG GCTTACGTCT ATATAAAAAA TACCAAAACC AAACTATTGA TAAAGTCTGT CAAGATCCTT TTCTTCTTGC AAAGGAAATG TATGGTGTAG GGTTTAAAAC TGCAGATCTC ATTGCCTCAT GTCTTGGAGT CCCACTGAAT TCTCCTAATC GTATCGTTGC AGGAATTCAA TACTCTTTAG ATGAACTGCA AGAAGAAGGC CATACGTGCT ATCCCCTTAA TGATTTCATT GTTCTCGTTG AAAAACTACT GAACGAAGAT ACTCCTGAAA AAATTGTACG TAAGGAAGAA ATCCTTACTC AAGTGCATTT TCTGTCTCGA CAAAAAGCTG TTTATATCAA AGAACTAGAA CAGGACTCTT ATATCTGGTC TAGACAGCTT TTTCTTGCCG AACAACAAAT CGCTATAGAC ATCCGAAGAC TTTTATTTTC TTCGAAACGC ATCCAGCCTA TCAATACCCA AGAGGCAATT CTTGAAGTAG AAAATCTTCT GGATTTAAAG CTGGAAGACA AGCAAAAAGA AGCTCTCTAT GCTAGTTCTT CCCAAAAAAT CCACATCATA TCTGGGGGAC CAGGAACTGG GAAAAGTACA ATTACACGGG CTATTCTCTC AATCTTTGAA AAAATCTCGT CTCCCCAAAA AATCATCCTT GCAGCTCCCA CTGGAAAAGC TGCAAAACGC ATGACGGAAA TCACAGGGAA ACGTACCCAA ACAATCCATT CCTTACTTCA ATATGATTTT AAGACTTTGT CATTTCGTAA AAATCATGAA GATCCTATTG ATTGCGATCT CGTTATTATT GATGAATCAG GAATGATCGA TACGATTCTC CTTCAAAGAT TCCTTGCTGC ATTACCTGAT CATGCTATTC TTATCCTAAT TGGAGATGTG CACCAGCTAC CTAGCGTAGG CCCAGGCAAT GTCCTTAAAG ACCTCATTCT TTCAAACCAT ATTGAGGTAA CCTACTTAAC CAAGATCTTC CGTCAGTTAC AAAATTCCAA TATCATTACT AATGCTCACA AAGTAAACCA GGGGGAATTC CCCGTCCTTA ACAGCTCTTC TGGAAAAAAA GACTTTTTAT TCTTTCAAAA AGAAGATCCA GAAGAGGCTA TAAAGCATAT TATCCATCTT GTTTCTGATT TCGTTCCGAA AAAATTCGGC ATCTTTATGA AAGACATTCA AGTCCTTGCT CCTATGAAAA AAGGAGTACT AGGGATTTTC AATCTGAATA AAGAATTGAA AGCTGCTCTC AACCCCAATA AACCATTTAT CCAAGGGAAG TTTCACTCCT TCTCTACGGG AGATCGCGTT ATGCAAACGC GAAATAACTA TAATAAAGAA GTTTTCAATG GAGATATTGG GTACATCGCC TCTATAGATT TTGCTAAAAA AAGTTTAGTA GCTTGTGTTG ATGGCCGATA TATTTGTTAT TCACAAACGG AACTAAACGA CTTAACACCA GCTTATGCTA CTTCCATACA TAAGTATCAG GGAAGTGAGG CCTCATGCGT GATTCTACCT ATCCATACCT CTCATTATGT TATGCTGTAT AGAAACCTCC TCTATACAGC AATCACGAGA GGGAAAAAAC TGGTTATTCT AGTAGGAACT AAAAAAGCTA TTGCTATCGC TGTACGCAAT GATAAAGTAC AACATCGATG CACTGGACTA CAACAATCTG TACAAACTCT CCTTAATAAG CCTATTCCGC TTTTCTCTCC CACATACACG ATTTGCAAAC CTTAG
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Protein sequence | MGCEEKLSGT LELILPEDSL SNQMGYAFLR VPYKNSLVTI CGNSSLSLFK IGASVDLTGY WSVDASGALV FRFTTAKTYS PSLGIIAYLT SQIKGVGPKL AQKIIATFGE ETLSVLDSCP SKLVEVDGIS LARCEDFSRQ LHEQKDLRNA LLFLQRHGIA IHYGLRLYKK YQNQTIDKVC QDPFLLAKEM YGVGFKTADL IASCLGVPLN SPNRIVAGIQ YSLDELQEEG HTCYPLNDFI VLVEKLLNED TPEKIVRKEE ILTQVHFLSR QKAVYIKELE QDSYIWSRQL FLAEQQIAID IRRLLFSSKR IQPINTQEAI LEVENLLDLK LEDKQKEALY ASSSQKIHII SGGPGTGKST ITRAILSIFE KISSPQKIIL AAPTGKAAKR MTEITGKRTQ TIHSLLQYDF KTLSFRKNHE DPIDCDLVII DESGMIDTIL LQRFLAALPD HAILILIGDV HQLPSVGPGN VLKDLILSNH IEVTYLTKIF RQLQNSNIIT NAHKVNQGEF PVLNSSSGKK DFLFFQKEDP EEAIKHIIHL VSDFVPKKFG IFMKDIQVLA PMKKGVLGIF NLNKELKAAL NPNKPFIQGK FHSFSTGDRV MQTRNNYNKE VFNGDIGYIA SIDFAKKSLV ACVDGRYICY SQTELNDLTP AYATSIHKYQ GSEASCVILP IHTSHYVMLY RNLLYTAITR GKKLVILVGT KKAIAIAVRN DKVQHRCTGL QQSVQTLLNK PIPLFSPTYT ICKP
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