Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TC0262 |
Symbol | pmpE/F-2 |
ID | 1246432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlamydia muridarum Nigg |
Kingdom | Bacteria |
Replicon accession | NC_002620 |
Strand | - |
Start bp | 308277 |
End bp | 311354 |
Gene Length | 3078 bp |
Protein Length | 1025 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637061062 |
Product | polymorphic membrane protein E/F family protein |
Protein accession | NP_296641 |
Protein GI | 15834882 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01376] Chlamydial polymorphic outer membrane protein repeat |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCGCA GAATTCTCCC TCTTTCACTT GTTTTCATTC CTTTATCTTG TATTTCGGCC AGTGAAACCG ATACACTCAA ACTTCCGAAC TTGACTTTTG GTGGTAGAGA GATTGAATTC ATAGTTACTC CGCCTAGCTC CATTGCTGCT CAATACATCA CTTACGCAAA TGTTTCTAAT TATAGAGGGA ACTTTACTAT TTCAAGTTGT ACGCAGGATC AATGGTTTTC GAGAGGTTTA AGCACTACAA ACTCTAGTGG AGCTTTTGTT GAGTCTATGA CTTCTTTCAC AGCCATTGAC AATGCAGACT TGTTTTTTTG TAACAATTAT TGCACCCATC AGGGAGGAGG GGGAGCTATA AATGCTACAG GCCTTATTAG CTTTAAAAAC AACCAAAACA TATTGTTCTA TAATAATACA ACTATTGGAA CTCAATTTAC AGGAGTAGCA TTAAGAACCG AAAGGAATCG CGGAGGGGCT TTATACGGAT CAAGCATCGA GCTAATTAAT AATCATAGCT TAAATTTTAT CAATAACACT TCTGGGGATA TGGGAGGAGC CGTATCCACA ATCCAAAACC TAGTTATCAA AAATACGTCC GGAATAGTTG CTTTTGAAAA TAACCATACT ACTGATCACA TACCCAACAC ATTTGCTACA ATTCTTGCTC GAGGAGGAGC TGTTGGCTGC CAAGGTGCCT GCGAAATCTC ACACAATACT GGTCCGGTAG TCTTCAATTC CAACTATGGA GGATACGGAG GAGCTATCAG CACCGGGGGA CAGTGTATTT TTAGAGATAA TAAGGATAAG CTTATTTTTA TAAATAATAG CGCTTTAGGA TGGCATAACA CTAGTGCTCA AGGAAATGGA GCAGTTATAA GCGCAGGAGG AGAGTTTGGT CTTCTAAATA ATAAAGGCCC TATCTACTTT GAGAATAATA ATGCCTCATA CATAGCAGGA GCTATTTCCT GCAACAACCT TAATTTTCAA GAAAATGGTC CTATCTATTT TCTTAATAAT TCGGCTCTGT ATGGAGGAGC TTTTCACCTA TTTGCAAGCC CAGCTGCGAA CTATATTCAT ACTGGCTCTG GGGATATTAT CTTCAACAAT AATACAGAGC TTTCAACTAC CGGAATGTCA GCAGGTTTGC GAAAACTTTT TTATATTCCT GGAACAACCA ACAATAACCC TATCACCCTA TCTCTTGGTG CTAAGAAAGA TACTCGCATC TATTTTTATG ATCTTTTTCA ATGGGGAGGC TTAAAAAAAG CTAATACACC CCCTGAAAAT AGCCCGCACA CCGTTACCAT CAATCCTTCG GATGAGTTCT CTGGCGCTGT TGTGTTTTCA TACAAAAACA TATCCAGTGA TCTACAAGCT CACATGATTG CCAGTAAAAC TCATAACCAA ATTAAAGACT CCCCCACTAC CTTGAAGTTT GGGACTATGT CCATAGAAAA TGGCGCAGAG TTTGAATTTT TCAATGGCCC TCTTACTCAA GAAAGCACTA GCCTTCTTGC TTTAGGACAA GATTCTATTC TTACTGTAGG GAAAGACGCT TCTCTCACTA TTACGCATCT TGGAATCATT TTGCCAGGTC TTCTCAATGA CCAAGGTACT ACAGCTCCAC GTATTCGTGT TAATCCCCAA GATATGACAC AGAATACAAA CTCTAACCAA GCTCCAGTAA GCACAGAGAA CGTGGCAACT CAAAAGATCT TTTTCTCCGG TCTTGTCTCG TTAGTAGATG AAAATTACGA ATCAGTTTAT GACAGCTGCG ACCTATCCCG AGGAAAAGCA AATCAACCCA TTTTACATAT CGAAACGACT AATGATGCGC AGTTAAGCAA TGATTGGAAA AACACTCTCA ATACCTCGCT ATATTCTTTA CCACATTACG GATACCAAGG ACTCTGGACA TCTAATTGGA TGACAACCAC CCGTACGGTC TCTCTTACCA ATAGTACAGA GACTCAAACA GCCAACAATT CTATTCAAGA ACAAAAAAAC ACTAGCGAAA CTTTTGATTC CAACAGTACA ACTACAGCTA AGATTCCTTC CATTAGAGCT TCTACAGGAG GAACAACTCC TCTTGCTACA ACGGACGTAA CAGTCACTAG ACACTCCTTA GTAGTGAGCT GGACCCCAAT CGGATATATA GCAGATCCTG CTCGTAGAGG GGATCTTATT GCGAATAATT TAGTGTCTTC TGGAAGAAAT ACAACCCTGT ACTTACGTTC ATTACTACCA GATGACTCTT GGTTCGCTTT ACAAGGATCT GCAGCTACGC TATTCACCAA ACAGCAGAAA CGCTTAGATT ATCACGGATA TTCTTCTGCA TCGAAAGGAT ATGCTATATC TTCACAAGCA TCAGGAGCAC ACGGACATAA GTTTTTATTT TCCTTTTCCC AATCCTCCGA CACAATGAAA GAGAAACGTA CCAATAATAA AATTTCTTCT CGTTATTATC TCTCCGCTCT GTGTTTTGAA CAACCTATGT TTGATCGTAT CGCTCTTATT GGAGCAGCTG CTTATAACTA TGGTACTCAT AAAACATATA ACTTCTATGG AACGAAAAAG TTTTCTAAAG GGAACTTTCA CTCTACGACT CTGGGGGGCT CTCTACGTTG CGAACTGCGG GATAGTATGC CTTTCCAATC GATTATGTTG ACACCATTCA TTCAAGCTCT CATCTCCCGA ACAGAGCCTG CATCTATCCA GGAGCAGGGA GACCTGGCTA GATTATTTTC GTTAAAACAA CCACATACAG CTGTTGTTTC TCCAATAGGA ATTAAAGGTG TTTATTCTTC GAATAAATGG CCAACTGTAT CCTGCGAAAT GGAGGTAGCA TACCAGCCTA CTCTTTACTG GAAGCGCCCC ATTCTTAATA CCGTTTTAAT CAAAAACAAT GGTTCTTGGG AAACAACAAA CACTCCTTTA GCTAAGCATT CCTTTTATGG GAGAGGATCA TCTTCTCTAA AATTCTCTTA TCTTAAACTA TTCGCTAATT ATCAAGCGCA GGTGGCTACT TCTACAGTCT CACACTACAT GAATGCAGGA GGGGCTCTGG TCTTTTAA
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Protein sequence | MTRRILPLSL VFIPLSCISA SETDTLKLPN LTFGGREIEF IVTPPSSIAA QYITYANVSN YRGNFTISSC TQDQWFSRGL STTNSSGAFV ESMTSFTAID NADLFFCNNY CTHQGGGGAI NATGLISFKN NQNILFYNNT TIGTQFTGVA LRTERNRGGA LYGSSIELIN NHSLNFINNT SGDMGGAVST IQNLVIKNTS GIVAFENNHT TDHIPNTFAT ILARGGAVGC QGACEISHNT GPVVFNSNYG GYGGAISTGG QCIFRDNKDK LIFINNSALG WHNTSAQGNG AVISAGGEFG LLNNKGPIYF ENNNASYIAG AISCNNLNFQ ENGPIYFLNN SALYGGAFHL FASPAANYIH TGSGDIIFNN NTELSTTGMS AGLRKLFYIP GTTNNNPITL SLGAKKDTRI YFYDLFQWGG LKKANTPPEN SPHTVTINPS DEFSGAVVFS YKNISSDLQA HMIASKTHNQ IKDSPTTLKF GTMSIENGAE FEFFNGPLTQ ESTSLLALGQ DSILTVGKDA SLTITHLGII LPGLLNDQGT TAPRIRVNPQ DMTQNTNSNQ APVSTENVAT QKIFFSGLVS LVDENYESVY DSCDLSRGKA NQPILHIETT NDAQLSNDWK NTLNTSLYSL PHYGYQGLWT SNWMTTTRTV SLTNSTETQT ANNSIQEQKN TSETFDSNST TTAKIPSIRA STGGTTPLAT TDVTVTRHSL VVSWTPIGYI ADPARRGDLI ANNLVSSGRN TTLYLRSLLP DDSWFALQGS AATLFTKQQK RLDYHGYSSA SKGYAISSQA SGAHGHKFLF SFSQSSDTMK EKRTNNKISS RYYLSALCFE QPMFDRIALI GAAAYNYGTH KTYNFYGTKK FSKGNFHSTT LGGSLRCELR DSMPFQSIML TPFIQALISR TEPASIQEQG DLARLFSLKQ PHTAVVSPIG IKGVYSSNKW PTVSCEMEVA YQPTLYWKRP ILNTVLIKNN GSWETTNTPL AKHSFYGRGS SSLKFSYLKL FANYQAQVAT STVSHYMNAG GALVF
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