Gene TC0084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTC0084 
Symbol 
ID1245614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlamydia muridarum Nigg 
KingdomBacteria 
Replicon accessionNC_002620 
Strand
Start bp101121 
End bp103430 
Gene Length2310 bp 
Protein Length769 aa 
Translation table11 
GC content39% 
IMG OID637060878 
Producthypothetical protein 
Protein accessionNP_296468 
Protein GI15834709 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCAATAC AACCAAAGTC CGTTTCTTTT ACTAAGAATT TAGTAGCACC TTGGGCCGGA 
GAGCAGGTTG ATTCTGCCGC GATGTATACA TCGCAGGCTG TTTTTTTCTT TCAGCAATTG
GACGAAAAAA GCAAAGCCCT AAAGCGGGCT TTAGGATTGC TTGAAGAACT TGATGTCGAA
AAGTTTACTC CATCGCTAGA AGAAACTCCC ACGATAATAC AGCCGGAAAT AACGGGAAGA
ATTTCCTATG ATGATATCGA GATTATAGAG TCTCTTACCC CTGATATAAT TTTAGCGGAT
CCTGATAGGG CTTCTGCTCA GGTTTTTGGG GAAGGGCTTG CGGATAGTTT TGATGACTGG
CTAACATTAT CGGAAAATGG AGGGCTTCAG GATCCTACTC CAGTAGAACA GGAAATAGTG
ACTAGGTATC AAACGGAGCT GAATGCTTTA CGTAATAAAC TCAAACAATC TGTATTAACG
CCCGATGAAT ATGCGAGACT GTATGCAATC CCTCAAACTT TTGTAAAAGA GATAGAAAGC
ATAAAGGATG AAAATAATGT TAGGCTGATT CCCAAGAGTA AGGTAACGAA CTTTTGGCAA
AATATTATGC TGACCTACAC GTCAGTGACA TCGTTATCGG AGCCTGTTTC CGATGCAATG
AATACCTCCA TAGCAGACTA TTCTCTTTAT ATCGAAAGAG CTACGCAAGC TGCTAGTTTA
ATTCGAGAGA TTACTAACCT TATCAAAGAT ATCTTCAATC CTATTTGGGA TTTAAGCACC
CAAATAATAA CGAATGCCTT CTCTTTAAAT GGAGCAGAGT TTAACTCATT AGAAGGAGGG
ATCATTCAAA GCTTATTAAG CTTTGCGGGG CTTTTTCGAC AGTTAATGAG CCGTACTTCA
ACTGTTGATG AGATTGGTGA TCTCTATCCT CAAAACGTCC AAAACCAAGA TGTTATTCAT
ACAGCTATCG ATGAGTATGT AAATTCTCTT ACTAATTTAA AAGTTAACGA TCATGTGCAA
CTCAATGGGC TTCTAAGCTT GGTTTATGCG TATGGAGCAA GTACTTTAGT TTTTACTCAA
AAGTCTATAT CCAATAGTAA TCAGATCTCT TTAACAGAGT ATAGCGCTGC TTTAGAAAAA
GAAATTCAGT ATTGGGTTCC TAGAGAAACT GCGAATTTCA AAATTTCTGA TCAAGCATTA
ACAACTTTTA AAGACAAACC TTCAGGGACT TATAACGGGG TTGCCCTTTT CGATTTTAAT
GGTTCAGCGG TCAACATTTT CAATCCTACA TTCTTCTTCG ACGTAGTTAG TCTTATGACT
ACAGATCCTA AGAAAGCAAT GACAAGAGAA GACTACAATA GGGTGATTGC TGCTTCAGAA
TCGAGTATTA GGAAAATCAA TGAATCCATT GCTGCATGGG AAGCTGCTAT TGCAGAATGT
AATGCAAAAA AAGTACAGAT GGATCCTGCA GGGCGCAACT ATTTTGATGC TATGGTTTTA
GCGAAGCAGA CTTTCGTGAA CACTTCTCCA ATACAGATGG TGTATGCGTC ATTGATGTTG
GATAAGTATC TTCCCAATCA GCAGTACATA CTGGAAACAT TGGGAAGTCA GATGACTTTC
TCCAATAAAG CCGCTCGGTA TTTAAATGAT ATTATTGCTC ACTCAGTAAG TTTTCAAACA
GCAGACGTGT ATTATGCTTT GGGGATGTAT CTTCGGCAGA TGAACGTTCA AGCATTTCCT
GAGTCAATTT CTCGAGCTAA AAATCTTTTA AACAAAGAGA TAGAGCGATG TCGTGCGGAT
CTATTTCACT GTCAAAGAGC TATAGAAGAG ATCAACAAGC TATCTGCAAG TGTAAAAGCA
GATACTGAAT TGACTTCATC CCAACGATCA GAGTTATTAG AAACTTTAGC TAGTTATGCT
TTTGAATTTA ACAACCTTTA TCACAATCTC TCTAATGTTT ATGCCATGGC TTCCGTCATA
CAGATTTCGG GTGTAGATAA ACCTGATGAA GTGGATAAAG CCTTCACTAC GACTATTGGA
ACAAAAGATT TAGATACCTG GATTCAACAA TTCACTATTT TTGAAAGTGC AGTTATTGAA
GGAGGGCGTG GTGGAGTGAT GCCTGGAGGA GAGCGACAGG TATTGCAAAG TCTAGAGAGT
AAGCAGCAAG ATTACACTTC TTTTAACCAG AATCAACAAT TGGCTTTACA AATGGAGTCT
GCTGCTATTC AGCAGGAGTG GACGATGGTA GCAGCAGCTT TAGCGTTGAT GAATCAAATC
TTCGCGAAGT TAATCCGTAG ATTTAAATAA
 
Protein sequence
MSIQPKSVSF TKNLVAPWAG EQVDSAAMYT SQAVFFFQQL DEKSKALKRA LGLLEELDVE 
KFTPSLEETP TIIQPEITGR ISYDDIEIIE SLTPDIILAD PDRASAQVFG EGLADSFDDW
LTLSENGGLQ DPTPVEQEIV TRYQTELNAL RNKLKQSVLT PDEYARLYAI PQTFVKEIES
IKDENNVRLI PKSKVTNFWQ NIMLTYTSVT SLSEPVSDAM NTSIADYSLY IERATQAASL
IREITNLIKD IFNPIWDLST QIITNAFSLN GAEFNSLEGG IIQSLLSFAG LFRQLMSRTS
TVDEIGDLYP QNVQNQDVIH TAIDEYVNSL TNLKVNDHVQ LNGLLSLVYA YGASTLVFTQ
KSISNSNQIS LTEYSAALEK EIQYWVPRET ANFKISDQAL TTFKDKPSGT YNGVALFDFN
GSAVNIFNPT FFFDVVSLMT TDPKKAMTRE DYNRVIAASE SSIRKINESI AAWEAAIAEC
NAKKVQMDPA GRNYFDAMVL AKQTFVNTSP IQMVYASLML DKYLPNQQYI LETLGSQMTF
SNKAARYLND IIAHSVSFQT ADVYYALGMY LRQMNVQAFP ESISRAKNLL NKEIERCRAD
LFHCQRAIEE INKLSASVKA DTELTSSQRS ELLETLASYA FEFNNLYHNL SNVYAMASVI
QISGVDKPDE VDKAFTTTIG TKDLDTWIQQ FTIFESAVIE GGRGGVMPGG ERQVLQSLES
KQQDYTSFNQ NQQLALQMES AAIQQEWTMV AAALALMNQI FAKLIRRFK