| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TC0040 |
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| Symbol | sctN |
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| ID | 1245565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlamydia muridarum Nigg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002620 |
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| Strand | + |
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| Start bp | 44843 |
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| End bp | 46171 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637060829 |
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| Product | type III secretion system ATPase |
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| Protein accession | NP_296424 |
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| Protein GI | 15834665 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1157] Flagellar biosynthesis/type III secretory pathway ATPase |
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| TIGRFAM ID | [TIGR01026] ATPase FliI/YscN family
[TIGR02546] type III secretion apparatus H+-transporting two-sector ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGAGC TAACGACCGA GTTTGATACG CTCATGACTG AATTGCCAGA AGTTCAATTG
ACGGCAGTTG TTGGGCGTAT TATCGAAGTT GTCGGGATGT TAATCAAAGC TGTCGTTCCG
GATGTTCGGG TGGGCGAAGT TTGCCTGGTG AAACGTCATG GAATGGAGCC TTTGGTAACA
GAGGTTGTCG GGTTTACGCA GAACTTTGTA TTTCTCTCTC CTTTAGGAGA GTTATCTGGA
GTGAGTCCTT CTTCTGAAGT GATCGCCACG GGATTGCCTT TGCACATTCG AGCAGGGGCA
GGACTTTTAG GCCGTGTATT GAATGGTCTT GGAGAACCTA TTGATATAGA GACCAAAGGA
CCTTTGGAGA ATGTCGATTC CATTTATCCC ATTTTTAAAG CTCCACCAGA TCCTTTGCAT
CGAGAAAAAT TGCGTACGAT TCTATCTACA GGAGTGCGTT GTATAGATGG AATGCTTACT
GTTGCCAAAG GACAAAGAAT CGGGATTTTT GCGGGAGCAG GGGTCGGAAA ATCTTCTTTG
TTAGGCATGA TTGCTCGTAA CGCAGAAGAA GCCGATATTA ACGTGATTGC GTTAATTGGA
GAGCGGGGAC GAGAAGTTCG GGAGTTTATA GAAAATGACC TTGGTGAAGA AGGAATGAAA
CGTTCCGTCA TTGTGGTATC TACTTCCGAT CAATCTTCTC AGCTTCGATT GAACGCTGCT
TATGTGGGAA CAGCTATAGC AGAATATTTT AGGGACCAGG GTAAGACAGT TGTGCTTATG
ATGGATTCTG TGACCCGGTT TGCTCGAGCT TTACGGGAAG TAGGGCTCGC AGCTGGAGAG
CCTCCTGCTC GTGCTGGGTA TACTCCTTCC GTATTTTCAA CATTGCCCAA ATTATTGGAA
AGAGCGGGAG CTTCGGAGAA AGGGACTATC ACGGCATTTT ATACCGTGTT AGTTGCTGGG
GATGATATGA ATGAGCCGGT GGCTGATGAG GTGAAGTCTA TTTTGGATGG GCATATCGTG
CTTTCCAACG CGTTAGCTCA AGCTTATCAT TATCCTGCGA TTGATGTGCT GGCTTCTATT
AGCCGATTAT TGACTGCAAT TGTTCCTGAA GAACAACGTC GAATTATTGG TCGTGCTAGG
GAAGTCTTAG CGAAATATAA AGCGAACGAG ATGTTGATTC GTATTGGGGA ATATCGTCGA
GGGTCTGATC GTGAGGTAGA TTTCGCGATT GACCATATTG ATAAATTGAA TCGTTTCCTC
AAGCAAGATA TTCATGAAAA AACAAATTAT GAGGAAGCTG CTCAGCAGTT GAGAGCAATA
TTCCGGTAA
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| Protein sequence | MKELTTEFDT LMTELPEVQL TAVVGRIIEV VGMLIKAVVP DVRVGEVCLV KRHGMEPLVT
EVVGFTQNFV FLSPLGELSG VSPSSEVIAT GLPLHIRAGA GLLGRVLNGL GEPIDIETKG
PLENVDSIYP IFKAPPDPLH REKLRTILST GVRCIDGMLT VAKGQRIGIF AGAGVGKSSL
LGMIARNAEE ADINVIALIG ERGREVREFI ENDLGEEGMK RSVIVVSTSD QSSQLRLNAA
YVGTAIAEYF RDQGKTVVLM MDSVTRFARA LREVGLAAGE PPARAGYTPS VFSTLPKLLE
RAGASEKGTI TAFYTVLVAG DDMNEPVADE VKSILDGHIV LSNALAQAYH YPAIDVLASI
SRLLTAIVPE EQRRIIGRAR EVLAKYKANE MLIRIGEYRR GSDREVDFAI DHIDKLNRFL
KQDIHEKTNY EEAAQQLRAI FR
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