Gene TC0005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTC0005 
Symbol 
ID1245529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlamydia muridarum Nigg 
KingdomBacteria 
Replicon accessionNC_002620 
Strand
Start bp5599 
End bp6801 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content41% 
IMG OID637060794 
Productaromatic amino acid aminotransferase 
Protein accessionNP_296389 
Protein GI15834630 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1448] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTCTTT TTGAACAGTT ACCTTCTTTC TCTCCGGATT CTATTCTTGG TTTAGCACAA 
GCTTTTCAAG AAGATCCTCG TGAGGATAAA ATTAATTTAT TACTGGGTAC TTACGAGCGA
GAAAAAAGCC GATACGGAGG ATTCTCAAGC GTCAGAAAGG CTCAAACAGT GTTTTTTGGT
GATGAGAAAG ATAAAAACTA TCTTCCCATC AGAGGATCCT CAGTTTTTTT AGACCAGATG
GCTGCTCTAT GTTTTGGCGA GATTGATGCT AATCGATGGA CTGGAGTGCA AGCTGTTGGT
GGGACTGGAG CCTTACATTT GGGCGCCTTA GTGTATGCTA AATCTTCTCT TGCAGGTAAA
GTCTATATCC CAGCTCAAAC TTGGGGGAAC CACTCTAGAA TTTTTTCTCG TCTAGGATTG
TCCCTAGAAC ATTATCCCTA CTATGATCAA GAAAAAAAAG ATCTCGATTT GCAAGGATTA
AAAGCATCTC TTCGGGATGC TCCTGAGGCT TCTTTAATTC TTTTACATTG TTGTTGTCAT
AACCCTACAG GGAAGGATAT TCCCCTTTCT GAATGGCCTG AAATTATTGC TATTATAAAG
GACAGAGGCC TCATTCCTTT CTTTGATATG GCTTATTTAG GTTTTGCTAA CGGAATAGTA
GAGGATCGCC GACCTGTTCG GCTTTGCATA GAGGCTGGAG TTGCTACTTT TGTTGCAGGA
AGTTGTAGTA AAAACTTCTC ATTATATGGT TCTCGGGTAG GATTTTTTGG GGTTGTTCAC
CAAGATAAAA CGGATTTGAG CAGGATACTT TCTTTCTTGG AAGAGCAGAT CCGTGGGGAA
TACTCTTCTC CTGCTAGAGA AGGTGTTGCA ATCGTTACCT CTATATTAGA GAATCCCTAC
TTGCGACAAG AGTGGGGGCT TGAACTGAAT GGTATTCGCC AGTCTTTGGA AGAAATTCGA
GCGAATTTTG TTATTGCAAT GAGAGAAGTA GCGGGACATT CTTTTGATTT CATCGCGTCT
CAGAAAGGAT TTTTTGGGTA TCCAGGTTTT TCAAAAGAGC AGGTTGTGTT CCTTAGAGAA
GAGCTTGGTA TTTATACAAC AGCTGGTGGA AGATTCAATT TAAATGGCAT TACAGATAAA
AATATAAATC GTGTTATCCA CGGTTTTGCT AAGGCCTATG AATACTCTCG GTCCGTATCA
TAA
 
Protein sequence
MSLFEQLPSF SPDSILGLAQ AFQEDPREDK INLLLGTYER EKSRYGGFSS VRKAQTVFFG 
DEKDKNYLPI RGSSVFLDQM AALCFGEIDA NRWTGVQAVG GTGALHLGAL VYAKSSLAGK
VYIPAQTWGN HSRIFSRLGL SLEHYPYYDQ EKKDLDLQGL KASLRDAPEA SLILLHCCCH
NPTGKDIPLS EWPEIIAIIK DRGLIPFFDM AYLGFANGIV EDRRPVRLCI EAGVATFVAG
SCSKNFSLYG SRVGFFGVVH QDKTDLSRIL SFLEEQIRGE YSSPAREGVA IVTSILENPY
LRQEWGLELN GIRQSLEEIR ANFVIAMREV AGHSFDFIAS QKGFFGYPGF SKEQVVFLRE
ELGIYTTAGG RFNLNGITDK NINRVIHGFA KAYEYSRSVS