| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TC0004 |
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| Symbol | |
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| ID | 1245527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlamydia muridarum Nigg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002620 |
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| Strand | + |
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| Start bp | 3266 |
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| End bp | 5410 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637060792 |
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| Product | transcript cleavage factor/unknown domain fusion protein |
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| Protein accession | NP_296388 |
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| Protein GI | 15834629 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1747] Uncharacterized N-terminal domain of the transcription elongation factor GreA |
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| TIGRFAM ID | [TIGR01462] transcription elongation factor GreA |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTATC TAGAAAAGCT ACAGTCCTTA ATGGAAAATC ATCCTTCGGA TTTTTTTAGT
TTGTGGGAAG AGTATTGCTT TAATGACGTC GTTAGTGGAG ACGAGTTGAT AGTCTTGCTG
GAAAAAATTA AAAGCTCAAG TATAGCTCCT GCCTTTGGGA AAATAGCAGA AAGCGTAATT
CCTCTTTGGG AACAACTTCC TGAAAGTGAA GAAAAAGATA AAGTGCTTTC TCTAGTCTTT
GATATCCAAA CAACAAACAG CAAGCGTTTA TTAGAACTAG CTCTTCAACA GGTTAAGAAG
TACGAGGACT CACCAAATTA TAAAGAAGCT TTGCGGATAG TCGGATTAAG AGATGGGATT
TTCTTTACTC ATTGCTTAAG ACATTTTGCT TTGCTTATGC ATCTTTGTGA AGGGAACTTT
GTTTTCCATC AGGGAGGATG GGGAGTAGGA GAGATTATGG GAGTTTCTTT CCTTCAGCAG
AAAGTCCTTG TTGAGTTTGA GGGAGTTCTT ACAGCAAAAG ATATTTCTTT TGAAACAGCC
TTTCGCATGC TGTCTCCTCT AAAAAAAGAT CACTTTTTAG CAAGACGGTT TGGGGATCCC
GATGCATTTG AGGCGTTTGC TAGAAAAGAT CCTGTTGCGG TCATAGAATG TCTGCTAAAA
GACCTTGGAC CCAAAAATGC TAAGGAAATC CGTAATGAGC TGGTTGGACT TGTGATTCCA
GAGGAGGATT GGAGTAGATG GTGGCAGTCC GCTAAGATTA AAATGAAGAA GGATTCACAT
ATCCTGGCGC CTACTTCTTC TAAAGATCCC TATATTTTTG ATCCAAAAGG TTTTTCTTTC
ATTTCTCAAT TACAAGCTTC TTTGTCGGGA AGCAACGATG CTAGTAAAAA GATCGCTTCT
TGTTACACAT TTGTTAGAGA TCTTGGGAGT GAGCTTAAGG ATGAGGCTAA TCGGCAGTTT
GTGATAAAAG AGTTAAAATC TTTAGATTTG CCAGCGGATT CCGCCTTATC CATTCAGAGA
GCGATGTTAT TATCTGAATT CCTCGGAGAT AAGTCTTCAG AATTAGATTG TGAAAACATT
GCTAAGCTTT CCGAAGATCA AATGTTTGAT ATTGTCAACC ATATTGAAAT TCTATCTTTT
CAGAAGAGTT TCCTATCGCT AATACACTCT TGCTCTCCAG CTTGGGTATC GGTATTTACA
AAAATTCTCC TGACAACAAG TACTTCTATT CTTCGCGATC AAGTCTTTAA AGCATTGATT
GTAGATAAAA AGGCTAGAGA AAGCATCTTA GAAAAAGTAT CAGCTATGAT TGAGCAACCC
TTGCTTTATC CTGAGCTGTT TGTTTGGTTG TTTTTGCGAG TAGTTTCTGG GGAAGACGGG
CTGTTTTCTG AGTCGGATAG GAAGGAAATT GGAAGACAGA TGCTAGCTAG TGCTTTAGAG
TTTATGCATA AAGTGGCTGG CTCTCCTCAA AAAGATCTTG GGAAAAAACT CTACTCATTC
TTAGTCGGTC AACGATTTCT TGCAATTCGT CAGATCATAG AAAATGCTTC TATAGATTAT
CTTAAAGAAT TTGTTTTATT ATCTTCAAAA TGCCCTCAGT TTACTCAAGG AGATCTTGGA
GTTTTGAGAA GTTTAGCAGA AGTTGTGCAA CCCGCTCTTA AACGAAGGGT TGCGGAAGAG
GAAAATATCC TTTGGACAAC CTCTGAGAGT TTTACTCGAA TGAAGGCAAA ACTTCAGTCT
CTTATTGGGA AGGAAATGGT GGATAATGCC AAAGAGATAG AGGATGCAAG AGCTCTAGGA
GACTTAAGAG AGAACTCTGA GTACAAATTT GCTTTGGAAA GACGGGCTAG ACTCCAGGAA
GAAATTCGAG TATTGTCTGA GGAAATTAAT CGCGCAAAAA TTCTAACAAA AGATGCTGTG
TTTACAAATT CTGTTGGAGT TGGTTGCAAG GTTGTTCTTG AGGATGAGCA AGGGGAAGAG
GATTGTTACA CAATACTAGG CCCTTGGGAC GCCAATCCAG AGGAAAAGAT TTTATCGTTA
AAATCTAAAC TTGCGCAAGA GATGGTTGGG AAGACAGTTG GAGAGAGTGT GCTATTCCAA
GGGAAGAAGC ACAAGATAAA ACAAATCTCT TCCATATGGG ACTAA
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| Protein sequence | MDYLEKLQSL MENHPSDFFS LWEEYCFNDV VSGDELIVLL EKIKSSSIAP AFGKIAESVI
PLWEQLPESE EKDKVLSLVF DIQTTNSKRL LELALQQVKK YEDSPNYKEA LRIVGLRDGI
FFTHCLRHFA LLMHLCEGNF VFHQGGWGVG EIMGVSFLQQ KVLVEFEGVL TAKDISFETA
FRMLSPLKKD HFLARRFGDP DAFEAFARKD PVAVIECLLK DLGPKNAKEI RNELVGLVIP
EEDWSRWWQS AKIKMKKDSH ILAPTSSKDP YIFDPKGFSF ISQLQASLSG SNDASKKIAS
CYTFVRDLGS ELKDEANRQF VIKELKSLDL PADSALSIQR AMLLSEFLGD KSSELDCENI
AKLSEDQMFD IVNHIEILSF QKSFLSLIHS CSPAWVSVFT KILLTTSTSI LRDQVFKALI
VDKKARESIL EKVSAMIEQP LLYPELFVWL FLRVVSGEDG LFSESDRKEI GRQMLASALE
FMHKVAGSPQ KDLGKKLYSF LVGQRFLAIR QIIENASIDY LKEFVLLSSK CPQFTQGDLG
VLRSLAEVVQ PALKRRVAEE ENILWTTSES FTRMKAKLQS LIGKEMVDNA KEIEDARALG
DLRENSEYKF ALERRARLQE EIRVLSEEIN RAKILTKDAV FTNSVGVGCK VVLEDEQGEE
DCYTILGPWD ANPEEKILSL KSKLAQEMVG KTVGESVLFQ GKKHKIKQIS SIWD
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