Gene TBFG_13950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_13950 
Symbol 
ID5224646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp4416196 
End bp4417416 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content63% 
IMG OID640608726 
Producthydrolase 
Protein accessionYP_001289877 
Protein GI148825123 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones449 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones253 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAGTC CGCGCCGCGA AGACGGCGAT GCGCTGCGCT GTGGCGACCG CAGTGCGGCC 
GTCACCGAGA TCCGGGCTGC GCTGACCGCG TTAGGGATGC TGGATCATCA GGAAGAAGAC
CTGACGACGG GCCGTAACGT CGCCCTTGAG TTGTTCGACG CGCAGCTCGA CCAGGCGGTC
CGTGCCTTCC AACAGCATCG CGGCCTGCTG GTGGACGGCA TCGTCGGTGA GGCCACCTAC
CGCGCGTTGA AAGAAGCCTC CTACCGGCTC GGGGCCCGCA CGCTGTACCA CCAATTCGGC
GCCCCGCTCT ACGGGGACGA CGTCGCTACA CTGCAGGCCC GGCTGCAGGA TCTTGGTTTC
TACACCGGGC TGGTCGACGG TCATTTCGGG TTGCAGACCC ACAATGCGTT GATGTCCTAT
CAGCGTGAGT ACGGACTTGC CGCAGACGGT ATCTGCGGCC CAGAAACGTT GCGCTCCTTG
TACTTTCTAA GTTCGCGAGT CAGCGGTGGC TCGCCACATG CGATTCGCGA AGAAGAGCTG
GTCCGCAGCT CGGGGCCGAA GCTGTCTGGC AAACGGATCA TCATTGATCC CGGTCGCGGC
GGCGTGGACC ACGGACTTAT CGCGCAAGGT CCGGCTGGGC CCATCAGCGA AGCAGACTTG
TTGTGGGACT TGGCAAGTCG GCTCGAAGGA CGGATGGCAG CTATCGGTAT GGAGACCCAC
CTGTCCCGTC CGACCAACCG TAGTCCGTCC GACGCAGAGC GTGCCGCCAC CGCCAACGCC
GTTGGCGCAG ACCTGATGAT CAGCCTGCGC TGCGAGACCC AGACCAGTCT CGCGGCCAAC
GGCGTGGCTT CCTTTCACTT CGGCAACTCG CACGGCTCGG TGTCTACCAT CGGCCGCAAT
CTTGCCGATT TCATTCAACG AGAAGTGGTG GCGCGCACCG GTTTACGGGA TTGCCGTGTG
CATGGTCGAA CGTGGGATCT GTTGCGGCTG ACCAGGATGC CGACCGTTCA GGTCGATATC
GGCTACATCA CCAACCCCCA CGATCGTGGG ATGCTGGTCT CAACGCAGAC GCGCGATGCC
ATCGCCGAAG GCATTCTCGC CGCGGTCAAA CGGCTGTATC TGTTAGGCAA GAACGATCGG
CCCACCGGCA CATTCACTTT CGCCGAGTTG CTGGCCCACG AACTGTCTGT CGAGCGAGCG
GGTAGACTCG GCGGTTCTTA A
 
Protein sequence
MPSPRREDGD ALRCGDRSAA VTEIRAALTA LGMLDHQEED LTTGRNVALE LFDAQLDQAV 
RAFQQHRGLL VDGIVGEATY RALKEASYRL GARTLYHQFG APLYGDDVAT LQARLQDLGF
YTGLVDGHFG LQTHNALMSY QREYGLAADG ICGPETLRSL YFLSSRVSGG SPHAIREEEL
VRSSGPKLSG KRIIIDPGRG GVDHGLIAQG PAGPISEADL LWDLASRLEG RMAAIGMETH
LSRPTNRSPS DAERAATANA VGADLMISLR CETQTSLAAN GVASFHFGNS HGSVSTIGRN
LADFIQREVV ARTGLRDCRV HGRTWDLLRL TRMPTVQVDI GYITNPHDRG MLVSTQTRDA
IAEGILAAVK RLYLLGKNDR PTGTFTFAEL LAHELSVERA GRLGGS