Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_13859 |
Symbol | |
ID | 5224555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | - |
Start bp | 4306226 |
End bp | 4312606 |
Gene Length | 6381 bp |
Protein Length | 2126 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640608635 |
Product | polyketide synthase pks2 |
Protein accession | YP_001289786 |
Protein GI | 148825032 |
COG category | [C] Energy production and conversion [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases [COG3321] Polyketide synthase modules and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 205 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGGCTTGG GGTCGGCGGC GTCAGGCACT GGTGCAGATA GGGGTGCATG GACGTTGGCT GAACCACGTG TGACTCCGGT TGCTGTTATC GGCATGGCTT GCCGGCTGCC CGGCGGGATC GATTCCCCCG AGTTGTTGTG GAAGGCGTTG TTACGAGGCG ACGACCTGAT CACCGAGGTG CCGCCGGACC GGTGGGATTG CGACGAGTTC TACGACCCGC AGCCGGGCGT GCCCGGTCGG ACGGTGTGCA AGTGGGGCGG TTTCCTGGAT AACCCCGCGG ATTTCGATTG CGAGTTCTTT GGCATCGGCG AGCGGGAGGC GATTGCGATC GATCCGCAGC AACGTCTGTT GCTGGAGACG TCCTGGGAGG CCATGGAGCA CGCCGGTCTT ACTCAGCAAA CGCTGGCAGG CTCGGCGACC GGCGTGTTCG GGGGTGTCAC CCATGGTGAC TACACGATGG TGGCGGCCGA CGCCAAACAA TTGGAGGAGC CGTACGGATA TCTGGGCAAC AGCTTCAGCA TGGCGTCGGG CCGGGTCGCC TACGCGATGC GACTGCACGG TCCGGCAATA ACCGTTGATA CCGCATGCTC GTCCGGCCTG ACGGCCGTGC ACATGGCGTG TCGCAGCCTG CACGAGGGTG AAAGCGACGT TGCCTTGGCG GGGGGTGTCG CCTTGATGCT GGAGCCACGC AAGGCCGCTG CTGGATCCGC TTTGGGCATG TTGTCCCCGA CCGGACGTTG TCGCGCGTTC GATGTCGCGG CTGACGGGTT CGTGTCAGGC GAGGGTTGTG CCGTGGTGGT GCTCAAGCGG TTGCCGGATG CATTGGCCGA CGGTGACCGG ATCCTGGCGG TAATTCGTGG CACGTCCGCA AATCAGGATG GCCACACGGT CAATATCGCG ACGCCTTCGC AGCCCGCACA GGTTGCGGCT TATCGAGCGG CGTTGGCTGC CGGTGGCGTG GACGCCGCGA CGGTCGGCAT GGTCGAAGCG CACGGCCCCG GCACCCCGAT CGGTGACCCC ATTGAATATG CAAGTGTCTC CGAGGTGTAT GGGGTCGACG GCCCGTGCGC ACTCGCATCG GTGAAGACCA ACTTCGGACA CACCCAGTCG ACCGCCGGGG TGCTAGGGCT AATCAAGGTG GTTCTCGCTC TGAAACATGG TGTGGTTCCA CGTAATCTGC ACTTCACTCG GCTGCCCGAT GAGATTGCTG GCATCACCAC CAACCTCTTC GTGCCCGAGG TGACCACACC GTGGCCCACC AACGGTCGTC AGGTGCCCCG GCGGGCGGCA GTGTCGTCTT ATGGGTTCTC GGGAACGAAC GTGCACGCTG TTGTGGAGCA AGCTCCGCAA ACCGAAGCCC AGCCCCACGC GGCGAGCACC CCCCCGACCG GCACCCCTGC CTTGTTCACG CTGTCCGCTT CCTCGGCCGA CGCGCTGCGG CAGACTGCTC AGCGGTTGAC CGACTGGATA CAGCAGCACG CCGACTCCCT GGTGCTCTCG GATCTTGCGT ACACGCTGGC GCGGCGGCGT ACGCACCGGT CGGTGCGCAC GGCGGTCATC GCGAGCAGCG TCGACGAGCT GATTGCCGGC TTGGGCGAGG TCGCCGACGG TGACACCGTT TACCAGCCCG CGGTGGGGCA GGATGACCGC GGGCCGGTCT GGTTATTCTC CGGGCAAGGG TCGCAGTGGG CAGCGATGGG CGCCGATCTG CTGACGAACG AATCGGTGTT CGCCGCGACC GTTGCGGAGC TAGAGCCATT GATCGCCGCG GAGTCCGGGT TCTCGGTCAC CGAGGCGATG ACGGCGCCCG AGGCCGTGAC TGGCATCGAC AGAGTTCAGC CGACCATCTT CGCGATGCAG GTCGCGTTGG CAGCCACGAT GGCGGCATAC GGAGTGCGCC CGGGCGCCGT GATCGGCCAC TCAATGGGTG AGTCGGCCGC GGCTGTGGTC GCAGGAGTGC TGTCAGCCGA AGATGGGGTA CGCGTCATCT GCCGACGATC AAAACTGATG GCGACGATCG CCGGTTCCGC GGCGATGGCG TCGGTGGAGT TGCCTGCCTT AGCTGTGCAG TCGGAATTGA CCGCTCTAGG CATCGACGAT GTGGTGGTCG CCGTGGTGAC CGCGCCGCAG TCCACCGTGA TCGCCGGAGG CACCGAGTCG GTGCGCAAGC TGGTCGACAT ATGGGAGCGG CGAGACGTGC TGGCGCGGGC GGTGGCCGTC GACGTGGCTT CGCATTCGCC GCAGGTGGAT CCGATCCTCG ACGAGTTGAT AGCTGCGCTG GCCGACCTGA ATCCGAAAGC TCCTGAGATT CCCTACTATT CGGCGACGCT TTTCGACCCG CGCGAAGCGC CGGCGTGCGA CGCGCGTTAC TGGGCCGACA ATTTGCGCCA CACCGTGCGG TTCTCCGCTG CGGTGCGCTC GGCGCTCGAC GACGGGTACC GAGTCTTCGC CGAGCTTTCG CCGCACCCGC TGCTGACCCA CGCGGTCGAT CAGATTGCCG GCAGTGTAGG CATGCCGGTT GCCGCGCTGG CCGGTATGCG GCGGGAGCAG CCATTGCCGC TGGGGCTCCG TCGCCTGCTG ACGGATCTGC ACAACGCTGG TGCGGCAGTG GACTTCTCGG TGCTCTGTCC CCAAGGCCGC TTGGTCGATG CTCCGCTGCC GGCGTGGTCG CACCGGTTCC TGTTCTATGA CCGCGAAGGC GTTGACAATC GGTCGCCGGG TGGCTCCACG GTAGCCGTGC ACCCGTTGTT GGGCGCACAC GTGCGATTGC CCGAAGAGCC GGAACGCCAC GCCTGGCAGG CCGATGTTGG TACCGCAACC TTGCCCTGGT TGGGCGATCA CCGGATACAC AACGTGGCTG CTCTTCCAGG GGCCGCCTAC TGCGAGATGG CGTTGTCTGC GGCCCGTGCC GTCCTCGGCG AGCAGTCCGA AGTACGCGAC ATGCGCTTTG AGGCGATGCT GCTGCTGGAT GACCAGACCC CGGTGTCCAC CGTGGCAACG GTGACCTCGC CCGGTGTCGT CGACTTCGCC GTCGAGGCCT TGCAGGAAGG CGTTGGGCAT CACTTGCGGC GTGCGTCGGC GGTGCTGCAG CAGGTATCCG GCGAATGCGA GCCGCCGGCG TACGACATGG CCTCCTTATT GGAAGCCCAC CCTTGCCGCG TGGACGGTGA GGATCTGCGC CGGCAATTCG ACAAGCACGG TGTGCAATAT GGTCCGGCCT TCACCGGCCT GGCCGTGGCC TATGTCGCGG AGGATGCGAC CGCCACAATG CTGGCCGAAG TCGCGCTGCC CGGCTCGATT CGTTCGCAGC AGGGCCTGTA CGCAATCCAC CCGGCCCTCC TGGATGCCTG TTTCCAGTCG GTCGGCGCGC ATCCCGATAG CCAGTCGGTA GGTAGCGGCC TATTGGTGCC GTTGGGGGTG CGCCGAGTCC GTGCCTATGC TCCGGTGCGT ACCGCTCGCT ATTGCTACAC GCGGGTGACC AAAGTCGAGT TGGTCGGCGT CGAGGCCGAT ATCGACGTGC TGGACGCGCA CGGCACGGTG TTGCTGGCCG TGTGCGGACT GCGAATCGGT ACGGGAGTGT CCGAGCGCGA CAAACACAAT CGGGTGCTGA ATGAGCGCTT ACTCACCATC GAATGGCACC AGCGTGAGCT GCCCGAGATG GACCCCTCTG GCGCTGGAAA ATGGCTGCTG ATCAGTGACT GCGCTGCCTC TGATGTGACC GCTACCCGGC TAGCGGACGC GTTTAGGGAA CACAGCGCGG CGTGCACGAC GATGCGGTGG CCACTGCACG ACGACCAGTT GGCCGCCGCC GACCAGCTAC GCGATCAAGT TGGTAGCGAC GAGTTTAGCG GCGTGGTCGT GCTCACCGGG TCGAACACCG GTACGCCGCA TCAGGGGAGC GCGGATCGCG GCGCTGAGTA CGTTCGCCGG CTGGTGGGTA TCGCTCGCGA ATTGTCAGAC CTTCCCGGGG CGGTTCCGCG CATGTACGTC GTGACGCGGG GTGCCCAGCG GGTGCTGGCC GACGACTGCG TCAATCTTGA GCAGGGCGGG CTGCGTGGTC TACTGCGGAC GATCGGCGCC GAGCACCCTC ACCTGCGTGC CACCCAGATC GACGTGGACG AACAGACCGG TGTCGAGCAG CTGGCACGCC AATTGCTGGC CACGTCGGAA GAAGACGAGA CCGCCTGGCG AGACAACGAG TGGTACGTGG CGCGCTTGTG TCCGACCCCG TTGCGTCCTC AGGAGCGGCG CACCATCGTC GCGGATCATC AGCAGAGCGG CATGCGCCTG CAGATCCGTA CCCCCGGCGA TATGCAAACG ATAGAGCTGG CCGCGTTTCA CCGCGTTCCA CCAGGACCAG GACAGATCGA GGTTGCGGTC CGTGCGTCCA GCGTCAACTT TGCCGATGTA CTCATCGCTT TCGGTCGCTA CCCCAGCTTC GAGGGACACC TGCCCCAGCT GGGCACGGAT TTCGCCGGCG TGGTGACCGC GGTCGGACCA GGCGTCACTG ACCACAAGGT TGGTGACCAT GTTGGTGGCA TGTCGCCTAA CGGCTGCTGG GGCACATTCG TCACGTGTGA CGCTCGGCTG GCCGCGACGC TGCCACCGGG CCTGGGTGAC GCACAGGCCG CTGCGGTGAC CACCGCGCAC GCCACCGCCT GGTACGGACT GCATGAGCTC GCCCGGATTA GGGCGGGTGA CACGGTGCTA ATTCACTCCG GCACCGGCGG GGTCGGACAA GCGGCGATCG CTATAGCCCG CGCGGCGGGC GCTGAGATCT TCGCCACCGC CGGTACCCCA CAGCGTCGAG AGCTATTGCG CAACATGGGT ATTGAGCATG TCTATGACTC GCGCAGCATC GAGTTCGCCG AGCAGATTCG GCGGGACACT AACGGCCGGG GTGTCGATGT CGTGCTCAAC TCGGTGACCG GCGCCGCGCA ACTTGCCGGG CTGAAACTGC TCGCCTTCCG GGGACGGTTC GTCGAGATTG GCAAGCGCGA CATCTATGGT GACACCAAGC TGGGGCTCTT TCCCTTCCGG CGCAACCTGT CCTTCTACGC CGTAGACCTG GGGTTGCTGT CTGCGACACA CCCAGAAGAG CTGCGCGACC TGCTCGGCAC GGTCTATCGC TTGACCGCAG CCGGCGAGTT GCCGATGCCG CAGAGCACCC ATTACCCCCT CGTCGAGGCG GCCACCGCCA TCCGTGTGAT GGGCAACGCC GAGCACACCG GCAAACTCGT CCTCCACATC CCACAGACCG GAAAAAGCCT CGTTACCCTG CCTCCGGAAC AAGCTCAGGT GTTCCGTCCC GACGGCTCCT ACATCATCAC CGGCGGCCTC GGTGGGCTAG GGCTGTTCCT GGCCGAGAAG ATGGCCGCGG CCGGTTGCGG CCGGATCGTG CTGAATTCCC GCACCCAGCC GACGCAAAAG ATGAGGGAAA CGATCGAGGC CATCGCGGCG ATGGGCTCTG AAGTCGTGGT GGAATGCGGT GACATCGCCC AACCGGGTAC CGCGGAGCGG TTGGTGGCGA CCGCTGTGGC CACCGGGCTT CCGGTACGAG GCGTGCTACA CGCGGCCGCG GTGGTCGAGG ACGCCACCTT GGCCAATATC ACCGACGAGT TGCTGGCGCG CGACTGGGCG CCAAAGGTTC ACGGTGCCTG GGAGTTGCAT GAAGCAACCA GCGGACAGCC GCTTGACTGG TTCTGCTTGT TTTCGTCGGC GGCAGCTCTC ACCGGCTCGC CGGGACAGAG TGCCTACTCA GCGGCCAACA GCTGGCTGGA CGCCTTCGCG CATTGGCGGC AAGCTCAGGG CCTGCCGGCT ACCGCGATCG CGTGGGGAGC CTGGTCGGAT ATCGGCCAGT TGGGGTGGTG GTCGGCATCG CCCGCGCGGG CTTCGGCATT GGAGGAAAGC AACTACACGG CGATCACTCC CGACGAAGGT GCTTACGCGT TCGAGGCGCT ATTGCGCCAC AACCGCGTCT ATACCGGCTA TGCCCCGGTC ATCGGAGCCC CGTGGCTGGT CGCCTTCGCA GAGCGCAGCC GGTTTTTCGA AGTGTTCTCC AGCAGCAACG GTTCGGGCAC AAGCAAATTC CGCGTCGAGC TGAACGAGCT GCCACGCGAC GAGTGGCCGG CGCGGCTTCG GCAGCTGGTC GCCGAGCAGG TCAGCCTGAT TCTGCGGCGC ACCGTCGACC CTGACCGCCC GCTACCCGAG TATGGACTTG ATTCGTTGGG CGCACTAGAG CTGCGCACTC GGATCGAGAC CGAGACCGGA ATCCGGTTGG CACCCAAGAA CGTCAGCGCC ACGGTGCGGG GCTTAGCGGA TCACTTGTAT GAACAGCTGG CGCCCGACGA CGCTCCTGCT GCCGCGCTGT CGTCACAGTA A
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Protein sequence | MGLGSAASGT GADRGAWTLA EPRVTPVAVI GMACRLPGGI DSPELLWKAL LRGDDLITEV PPDRWDCDEF YDPQPGVPGR TVCKWGGFLD NPADFDCEFF GIGEREAIAI DPQQRLLLET SWEAMEHAGL TQQTLAGSAT GVFGGVTHGD YTMVAADAKQ LEEPYGYLGN SFSMASGRVA YAMRLHGPAI TVDTACSSGL TAVHMACRSL HEGESDVALA GGVALMLEPR KAAAGSALGM LSPTGRCRAF DVAADGFVSG EGCAVVVLKR LPDALADGDR ILAVIRGTSA NQDGHTVNIA TPSQPAQVAA YRAALAAGGV DAATVGMVEA HGPGTPIGDP IEYASVSEVY GVDGPCALAS VKTNFGHTQS TAGVLGLIKV VLALKHGVVP RNLHFTRLPD EIAGITTNLF VPEVTTPWPT NGRQVPRRAA VSSYGFSGTN VHAVVEQAPQ TEAQPHAAST PPTGTPALFT LSASSADALR QTAQRLTDWI QQHADSLVLS DLAYTLARRR THRSVRTAVI ASSVDELIAG LGEVADGDTV YQPAVGQDDR GPVWLFSGQG SQWAAMGADL LTNESVFAAT VAELEPLIAA ESGFSVTEAM TAPEAVTGID RVQPTIFAMQ VALAATMAAY GVRPGAVIGH SMGESAAAVV AGVLSAEDGV RVICRRSKLM ATIAGSAAMA SVELPALAVQ SELTALGIDD VVVAVVTAPQ STVIAGGTES VRKLVDIWER RDVLARAVAV DVASHSPQVD PILDELIAAL ADLNPKAPEI PYYSATLFDP REAPACDARY WADNLRHTVR FSAAVRSALD DGYRVFAELS PHPLLTHAVD QIAGSVGMPV AALAGMRREQ PLPLGLRRLL TDLHNAGAAV DFSVLCPQGR LVDAPLPAWS HRFLFYDREG VDNRSPGGST VAVHPLLGAH VRLPEEPERH AWQADVGTAT LPWLGDHRIH NVAALPGAAY CEMALSAARA VLGEQSEVRD MRFEAMLLLD DQTPVSTVAT VTSPGVVDFA VEALQEGVGH HLRRASAVLQ QVSGECEPPA YDMASLLEAH PCRVDGEDLR RQFDKHGVQY GPAFTGLAVA YVAEDATATM LAEVALPGSI RSQQGLYAIH PALLDACFQS VGAHPDSQSV GSGLLVPLGV RRVRAYAPVR TARYCYTRVT KVELVGVEAD IDVLDAHGTV LLAVCGLRIG TGVSERDKHN RVLNERLLTI EWHQRELPEM DPSGAGKWLL ISDCAASDVT ATRLADAFRE HSAACTTMRW PLHDDQLAAA DQLRDQVGSD EFSGVVVLTG SNTGTPHQGS ADRGAEYVRR LVGIARELSD LPGAVPRMYV VTRGAQRVLA DDCVNLEQGG LRGLLRTIGA EHPHLRATQI DVDEQTGVEQ LARQLLATSE EDETAWRDNE WYVARLCPTP LRPQERRTIV ADHQQSGMRL QIRTPGDMQT IELAAFHRVP PGPGQIEVAV RASSVNFADV LIAFGRYPSF EGHLPQLGTD FAGVVTAVGP GVTDHKVGDH VGGMSPNGCW GTFVTCDARL AATLPPGLGD AQAAAVTTAH ATAWYGLHEL ARIRAGDTVL IHSGTGGVGQ AAIAIARAAG AEIFATAGTP QRRELLRNMG IEHVYDSRSI EFAEQIRRDT NGRGVDVVLN SVTGAAQLAG LKLLAFRGRF VEIGKRDIYG DTKLGLFPFR RNLSFYAVDL GLLSATHPEE LRDLLGTVYR LTAAGELPMP QSTHYPLVEA ATAIRVMGNA EHTGKLVLHI PQTGKSLVTL PPEQAQVFRP DGSYIITGGL GGLGLFLAEK MAAAGCGRIV LNSRTQPTQK MRETIEAIAA MGSEVVVECG DIAQPGTAER LVATAVATGL PVRGVLHAAA VVEDATLANI TDELLARDWA PKVHGAWELH EATSGQPLDW FCLFSSAAAL TGSPGQSAYS AANSWLDAFA HWRQAQGLPA TAIAWGAWSD IGQLGWWSAS PARASALEES NYTAITPDEG AYAFEALLRH NRVYTGYAPV IGAPWLVAFA ERSRFFEVFS SSNGSGTSKF RVELNELPRD EWPARLRQLV AEQVSLILRR TVDPDRPLPE YGLDSLGALE LRTRIETETG IRLAPKNVSA TVRGLADHLY EQLAPDDAPA AALSSQ
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