| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_13615 |
|---|
| Symbol | ispD |
|---|
| ID | 5224304 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium tuberculosis F11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009565 |
|---|
| Strand | - |
|---|
| Start bp | 4037125 |
|---|
| End bp | 4037820 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640608384 |
|---|
| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
|---|
| Protein accession | YP_001289542 |
|---|
| Protein GI | 148824788 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
|---|
| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 429 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 197 |
|---|
| Fosmid unclonability p-value | 0.3177 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTCAGGG AAGCGGGCGA AGTAGTTGCG ATCGTCCCGG CTGCGGGGTC GGGGGAGCGG
TTGGCCGTCG GTGTGCCCAA GGCGTTTTAC CAGCTCGACG GGCAGACTCT CATTGAGCGG
GCCGTCGATG GCCTGCTGGA TTCGGGGGTA GTTGACACCG TTGTTGTGGC CGTGCCCGCC
GACCGTACGG ACGAGGCGAG GCAGATCCTC GGCCACAGGG CGATGATTGT GGCGGGTGGG
TCGAATCGCA CTGACACCGT GAACCTGGCG CTGACAGTGC TGTCCGGGAC CGCGGAGCCG
GAGTTTGTGC TTGTGCATGA TGCCGCGCGG GCACTGACAC CACCGGCCCT GGTCGCCCGG
GTGGTCGAGG CGTTGCGGGA CGGTTATGCC GCCGTCGTTC CCGTACTGCC GCTTTCTGAC
ACCATCAAGG CCGTGGATGC CAACGGGGTG GTCCTGGGCA CGCCGGAACG AGCCGGGCTG
CGGGCCGTGC AGACCCCACA AGGGTTCACT ACCGACCTGC TGCTGCGGTC ATATCAGCGC
GGCTCCCTAG ACCTTCCAGC CGCCGAGTAC ACCGATGACG CGTCGCTGGT CGAGCATATC
GGCGGCCAGG TGCAGGTGGT CGACGGCGAT CCGCTGGCGT TCAAGATCAC CACCAAACTG
GATCTGTTGC TGGCCCAAGC TATAGTGCGC GGGTGA
|
|---|
| Protein sequence | MVREAGEVVA IVPAAGSGER LAVGVPKAFY QLDGQTLIER AVDGLLDSGV VDTVVVAVPA
DRTDEARQIL GHRAMIVAGG SNRTDTVNLA LTVLSGTAEP EFVLVHDAAR ALTPPALVAR
VVEALRDGYA AVVPVLPLSD TIKAVDANGV VLGTPERAGL RAVQTPQGFT TDLLLRSYQR
GSLDLPAAEY TDDASLVEHI GGQVQVVDGD PLAFKITTKL DLLLAQAIVR G
|
|---|
| |