Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_13494 |
Symbol | |
ID | 5224183 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | - |
Start bp | 3891175 |
End bp | 3892218 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640608263 |
Product | DNA-directed RNA polymerase subunit alpha |
Protein accession | YP_001289421 |
Protein GI | 148824667 |
COG category | [K] Transcription |
COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
Num covering plasmid clones | 280 |
Plasmid unclonability p-value | 0.000323632 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 199 |
Fosmid unclonability p-value | 0.411483 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGATCT CACAGCGCCC CACCCTGTCC GAGGACGTCC TCACCGACAA CCGATCCCAG TTCGTGATCG AACCGCTGGA GCCGGGATTC GGCTACACCC TGGGCAATTC GCTGCGTCGC ACCCTGCTGT CGTCGATTCC CGGAGCGGCC GTCACCAGCA TTCGCATCGA TGGTGTACTG CACGAATTCA CCACGGTGCC CGGGGTCAAA GAAGATGTCA CCGAGATCAT CCTGAATCTC AAGAGCCTGG TGGTGTCCTC GGAGGAGGAC GAGCCGGTCA CCATGTACCT ACGCAAGCAG GGTCCGGGTG AGGTTACCGC CGGCGACATC GTGCCGCCGG CCGGCGTCAC CGTGCACAAC CCCGGCATGC ACATCGCCAC GCTGAACGAT AAGGGCAAGC TGGAAGTCGA GCTCGTCGTC GAGCGTGGCC GCGGCTATGT CCCGGCGGTG CAAAACCGGG CTTCGGGTGC CGAAATTGGG CGCATTCCAG TCGATTCCAT CTACTCACCG GTGCTCAAAG TGACCTACAA GGTGGACGCC ACCCGGGTCG AGCAGCGCAC CGACTTCGAC AAGCTGATCC TGGACGTGGA GACCAAGAAT TCAATCAGCC CGCGCGACGC GCTGGCGTCG GCTGGCAAGA CGCTGGTCGA GTTGTTCGGC CTGGCACGGG AACTCAACGT CGAGGCCGAA GGCATCGAGA TCGGGCCGTC GCCGGCCGAG GCCGATCACA TTGCGTCATT CGCCCTGCCG ATCGACGACC TGGATCTGAC GGTGCGGTCC TACAACTGCC TCAAGCGCGA GGGGGTGCAC ACCGTGGGCG AACTGGTGGC GCGCACCGAA TCCGACCTGC TTGACATCCG CAACTTCGGT CAGAAGTCCA TCGACGAGGT GAAGATCAAG CTGCACCAGC TGGGCCTGTC ACTCAAGGAC AGCCCGCCGA GCTTCGACCC CTCGGAGGTC GCGGGCTACG ACGTCGCCAC CGGCACCTGG TCGACCGAGG GCGCGTACGA CGAGCAGGAC TACGCCGAAA CCGAACAGCT TTAG
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Protein sequence | MLISQRPTLS EDVLTDNRSQ FVIEPLEPGF GYTLGNSLRR TLLSSIPGAA VTSIRIDGVL HEFTTVPGVK EDVTEIILNL KSLVVSSEED EPVTMYLRKQ GPGEVTAGDI VPPAGVTVHN PGMHIATLND KGKLEVELVV ERGRGYVPAV QNRASGAEIG RIPVDSIYSP VLKVTYKVDA TRVEQRTDFD KLILDVETKN SISPRDALAS AGKTLVELFG LARELNVEAE GIEIGPSPAE ADHIASFALP IDDLDLTVRS YNCLKREGVH TVGELVARTE SDLLDIRNFG QKSIDEVKIK LHQLGLSLKD SPPSFDPSEV AGYDVATGTW STEGAYDEQD YAETEQL
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