| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_12946 |
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| Symbol | |
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| ID | 5223632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium tuberculosis F11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009565 |
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| Strand | + |
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| Start bp | 3262548 |
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| End bp | 3267161 |
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| Gene Length | 4614 bp |
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| Protein Length | 1537 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640607712 |
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| Product | phenolpthiocerol synthesis type-I polyketide synthase ppsB |
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| Protein accession | YP_001288875 |
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| Protein GI | 148824121 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
[COG3321] Polyketide synthase modules and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 61 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 211 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAACGG CTTTCAGCCG GATTTCCGGT ATGACCGCGC AACAGCGCAC CTCCCTAGCC
GACGAGTTCG ACAGGGTCTC TCGCATCGCC GTGGCCGAGC CGGTTGCGGT GGTTGGCATC
GGCTGCCGCT TTCCGGGAGA TGTGGATGGA CCAGAGAGTT TCTGGGACTT TCTGGTCGCG
GGCAGGAATG CGATCTCGAC GGTGCCGGCA GATCGATGGG ACGCAGAAGC GTTTTACCAC
CCCGACCCGC TAACACCGGG GCGGATGACG ACGAAGTGGG GCGGCTTCGT CCCTGACGTC
GCGGGCTTCG ACGCCGAATT CTTCGGTATC ACACCGCGGG AAGCCGCGGC GATGGACCCG
CAGCAGCGAA TGCTGCTGGA GGTTGCCTGG GAAGCACTCG AACATGCCGG CATACCACCG
GATTCCCTCG GCGGCACCCG AACCGCCGTC ATGATGGGGG TCTATTTCAA CGAGTATCAG
TCCATGTTGG CCGCCAGTCC GCAGAACGTA GACGCCTACA GCGGGACCGG AAATGCACAC
AGCATCACGG TGGGTCGCAT CTCCTACCTG TTGGGATTAC GGGGTCCGGC GGTCGCGGTG
GACACCGCCT GCTCGTCGTC GTTGGTGGCT GTGCACCTGG CGTGTCAGAG TCTGAGGCTG
CGCGAGACCG ATCTGGCTCT CGCCGGTGGA GTGAGTATCA CCCTTCGCCC AGAGACCCAA
ATCGCTATCT CTGCCTGGGG ATTGCTGTCC CCGCAGGGCC GGTGTGCCGC ATTCGATGCG
GCGGCAGACG GATTTGTGCG CGGTGAGGGC GCCGGAGTGG TAGTGCTCAA GCGGTTGACG
GACGCGGTGC GCGACGGCGA CCAGGTGCTG GCGGTGGTGC GCGGTTCGGC AGTCAACCAG
GACGGCAGGT CCAATGGCGT AACGGCGCCG AATACGGCAG CCCAGTGCGA TGTGATCGCC
GATGCCTTGC GATCCGGCGA TGTGGCGCCT GACAGCGTGA ATTACGTAGA GGCCCATGGA
ACCGGCACGG TGCTGGGCGA CCCGATCGAA TTCGAGGCCC TGGCCGCCAC GTATGGCCAC
GGCGGGGACG CATGCGCGTT GGGTGCGGTG AAAACCAACA TCGGTCATCT GGAGGCGGCC
GCCGGGATCG CGGGGTTCAT CAAGGCGACG CTGGCGGTAC AACGCGCGAC GATCCCGCCG
AATCTGCATT TCTCGCAATG GAATCCAGCT ATCGATGCCG CGTCGACCAG GTTTTTCGTT
CCCACGCAGA ACTCCCCGTG GCCAACCGCG GAGGGGCCGC GCCGGGCGGC GGTGTCGTCG
TTCGGATTGG GCGGGACGAA CGCACACGTG ATCATCGAGC AAGGTAGCGA GCTGGCTCCG
GTATCCGAAG GCGGCGAGGA CACCGGGGTG TCGACGTTGG TGGTGACGGG TAAGACGGCC
CAGCGGATGG CCGCGACGGC GCAGGTGCTG GCCGACTGGA TGGAAGGTCC GGGCGCCGAG
GTGGCCGTAG CTGATGTCGC CCACACGGTC AACCATCACC GGGCCCGCCA AGCCACGTTC
GGCACCGTCG TAGCCCGTGA CCGCGCCCAG GCGATAGCCG GACTGCGCGC GCTGGCCGCC
GGCCAACACG CTCCCGGAGT GGTGAGCCAC CAGGACGGTT CGCCGGGGCC GGGCACCGTA
TTCGTCTACT CCGGCCGCGG CTCGCAGTGG GCCGGGATGG GTCGCCAATT GTTGGCCGAC
GAGCCGGCTT TCGCCGCCGC GGTCGCCGAG CTGGAACCGG TGTTTGTCGA GCAAGCCGGC
TTCTCGCTGC GCGACGTGAT CGCCACCGGC AAGGAGCTAG TCGGTATCGA GCAGATCCAG
CTTGGCCTGA TCGGCATGCA ACTGACATTG ACTGAGCTAT GGCGCTCCTA CGGGGTGCAG
CCCGACCTGG TGATCGGCCA CTCCATGGGC GAGGTGGCCG CCGCCGTGGT CGCCGGAGCG
CTGACTCCGG CCGAGGGTCT GCGGGTGACC GCCACCCGCG CACGGTTGAT GGCGCCATTG
TCCGGCCAGG GCGGCATGGC ACTGCTGGGA CTCGATGCTG CGGCCACCGA AGCGTTAATC
GCGGACTACC CGCAGGTGAC AGTGGGGATC TACAACTCGC CGCGGCAGAC CGTGATCGCC
GGGCCGACCG AACAAATCGA TGAGTTGATC GCCCGGGTGC GCGCGCAAAA CCGGTTTGCC
AGTCGGGTCA ATATCGAAGT CGCCCCGCAC AATCCGGCCA TGGATGCGCT GCAGCCGGCG
ATGCGTTCGG AGCTGGCCGA TCTGACCCCA CGGACCCCCA CCATCGGAAT CATCTCCACC
ACCTACGCAG ACTTGCACAC CCAACCGATC TTCGACGCCG AACACTGGGC CACCAACATG
CGCAACCCCG TGCGCTTCCA GCAGGCCATC GCTTCCGCCG GTAGCGGCGC CGACGGCGCC
TACCACACCT TCATCGAGAT CAGCGCACAC CCGCTGCTGA CCCAGGCGAT TGCCGACACC
TTGGAAGACG CGCACCGCCC AACCAAGTCC GCAGCGAAAT ACTTGAGCAT TGGCACCTTG
CAGCGTGATG CCGATGACAC GGTCACCTTC CGCACCAACC TCTACACCGC CGACATCGCC
CACCCACCGC ATACCTGTCA CCCGCCCGAG CCGCACCCCA CCATCCCCAC CACACCCTGG
CAACACACCC ACCACTGGAT CGCCACCACG CACCCGAGCA CGGCAGCGCC AGAAGATCCG
GGCAGCAATA AGGTTGTGGT GAACGGACAA TCGACATCCG AGAGCCGTGC GCTCGAAGAC
TGGTGCCACC AGCTGGCCTG GCCGATCCGC CCGGCAGTCA GCGCCGACCC GCCCAGCACC
GCCGCCTGGC TCGTGGTGGC AGACAACGAA CTCTGCCACG AGCTGGCCCG TGCGGCCGAT
TCTCGGGTAG ACAGCCTCTC GCCGCCGGCG CTCGCAGCAG GCAGCGATCC GGCCGCACTG
CTCGACGCGC TGCGCGGTGT GGACAACGTG CTCTACGCTC CACCCGTCCC CGGTGAACTC
CTCGATATTG AATCGGCCTA CCAGGTTTTC CACGCAACGC GACGGCTAGC CGCCGCGATG
GTCGCCAGCA GCGCCACGGC TATTTCCCCG CCGAAGTTGT TCATCATGAC CCGCAACGCC
CAGCCCATCT CGGAAGGCGA CCGAGCCAAC CCTGGCCACG CTGTGCTGTG GGGTCTCGGC
CGGTCGCTGG CACTAGAGCA TCCTGAAATC TGGGGCGGCA TAATCGATCT CGACGATTCG
ATGCCCGCAG AGCTGGCCGT GCGGCATGTG CTGACTGCAG CCCACGGTAC CGACGGGGAG
GATCAGGTCG TATACCGGTC GGGCGCACGC CATGTACCCC GGCTGCAGAG GCGAACTCTT
CCGGGGAAAC CGGTCACGTT GAATGCCGAC GCCAGCCAGC TCGTCATCGG TGCGACCGGC
AACATCGGAC CGCATCTCAT CCGACAGCTC GCGCGGATGG GGGCTAAGAC AATCGTCGCG
ATGGCTCGCA AGCCCGGCGC GCTCGACGAG TTGACCCAAT GTCTCGCTGC GACCGGAACA
GATCTCATCG CGGTGGCCGC CGATGCGACC GATCCCGCCG CCATGCAAAC CCTGTTCGAC
CGATTCGGCA CGGAGCTACC GCCACTGGAG GGAATCTATC TGGCGGCCTT TGCGGGCCGC
CCAGCGCTGC TGAGCGAGAT GACCGACGAC GACGTGACCA CCATGTTTCG TCCCAAGTTG
GACGCCTTGG CGTTGTTGCA CCGACGGTCA CTGAAGAGCC CAGTGCGCCA CTTCGTTTTG
TTCTCTTCGG TGTCAGGTCT GCTGGGTTCT CGATGGCTCG CCCATTACAC CGCGACCAGC
GCCTTCCTGG ACAGCTTCGC CGGCGCGCGT CGCACCATGG GCCTGCCGGC CACCGTCGTC
GACTGGGGAC TGTGGAAGTC GCTGGCCGAT GTGCAAAAAG ACGCGACTCA AATCAGCGCG
GAATCCGGGC TGCAACCCAT GGCTGACGAG GTGGCCATCG GCGCGCTACC GCTGGTGATG
AACCCCGATG CGGCAGTCGC GACCGTGGTG GTTGCCGCGG ACTGGCCCTT GTTGGCCGCG
GCATATCGAA CGCGGGGAGC CCTTCGCATA GTCGACGACC TGTTGCCGGC ACCGGAAGAC
GTCGGGAAGG GCGAAAGCGA ATTCCGCACA TCGTTGCGTA GCTGCCCGGC GGAGAAACGA
CGGGACATGT TGTTCGACCA TGTGGGCGCC TTGGCCGCCA CGGTGATGGG AATGCCGCCC
ACGGAGCCGC TCGATCCGTC GGCCGGCTTC TTCCAACTCG GCATGGACTC GCTAATGAGC
GTGACACTTC AGCGGGCGTT GTCGGAAAGC CTGGGCGAGT TCTTGCCGGC GTCCGTGGTT
TTCGACTATC CGACCGTTTA CAGCCTCACC GACTACCTGG CCACCGTCCT GCCTGAGCTC
CTCGAAATTG GGGCAACCGC AGTCGCAACC CAGCAAGCCA CCGACTCCTA CCACGAACTG
ACCGAAGCCG AGTTGTTGGA ACAACTTTCG GAACGACTAA GAGGAACACA ATGA
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| Protein sequence | MRTAFSRISG MTAQQRTSLA DEFDRVSRIA VAEPVAVVGI GCRFPGDVDG PESFWDFLVA
GRNAISTVPA DRWDAEAFYH PDPLTPGRMT TKWGGFVPDV AGFDAEFFGI TPREAAAMDP
QQRMLLEVAW EALEHAGIPP DSLGGTRTAV MMGVYFNEYQ SMLAASPQNV DAYSGTGNAH
SITVGRISYL LGLRGPAVAV DTACSSSLVA VHLACQSLRL RETDLALAGG VSITLRPETQ
IAISAWGLLS PQGRCAAFDA AADGFVRGEG AGVVVLKRLT DAVRDGDQVL AVVRGSAVNQ
DGRSNGVTAP NTAAQCDVIA DALRSGDVAP DSVNYVEAHG TGTVLGDPIE FEALAATYGH
GGDACALGAV KTNIGHLEAA AGIAGFIKAT LAVQRATIPP NLHFSQWNPA IDAASTRFFV
PTQNSPWPTA EGPRRAAVSS FGLGGTNAHV IIEQGSELAP VSEGGEDTGV STLVVTGKTA
QRMAATAQVL ADWMEGPGAE VAVADVAHTV NHHRARQATF GTVVARDRAQ AIAGLRALAA
GQHAPGVVSH QDGSPGPGTV FVYSGRGSQW AGMGRQLLAD EPAFAAAVAE LEPVFVEQAG
FSLRDVIATG KELVGIEQIQ LGLIGMQLTL TELWRSYGVQ PDLVIGHSMG EVAAAVVAGA
LTPAEGLRVT ATRARLMAPL SGQGGMALLG LDAAATEALI ADYPQVTVGI YNSPRQTVIA
GPTEQIDELI ARVRAQNRFA SRVNIEVAPH NPAMDALQPA MRSELADLTP RTPTIGIIST
TYADLHTQPI FDAEHWATNM RNPVRFQQAI ASAGSGADGA YHTFIEISAH PLLTQAIADT
LEDAHRPTKS AAKYLSIGTL QRDADDTVTF RTNLYTADIA HPPHTCHPPE PHPTIPTTPW
QHTHHWIATT HPSTAAPEDP GSNKVVVNGQ STSESRALED WCHQLAWPIR PAVSADPPST
AAWLVVADNE LCHELARAAD SRVDSLSPPA LAAGSDPAAL LDALRGVDNV LYAPPVPGEL
LDIESAYQVF HATRRLAAAM VASSATAISP PKLFIMTRNA QPISEGDRAN PGHAVLWGLG
RSLALEHPEI WGGIIDLDDS MPAELAVRHV LTAAHGTDGE DQVVYRSGAR HVPRLQRRTL
PGKPVTLNAD ASQLVIGATG NIGPHLIRQL ARMGAKTIVA MARKPGALDE LTQCLAATGT
DLIAVAADAT DPAAMQTLFD RFGTELPPLE GIYLAAFAGR PALLSEMTDD DVTTMFRPKL
DALALLHRRS LKSPVRHFVL FSSVSGLLGS RWLAHYTATS AFLDSFAGAR RTMGLPATVV
DWGLWKSLAD VQKDATQISA ESGLQPMADE VAIGALPLVM NPDAAVATVV VAADWPLLAA
AYRTRGALRI VDDLLPAPED VGKGESEFRT SLRSCPAEKR RDMLFDHVGA LAATVMGMPP
TEPLDPSAGF FQLGMDSLMS VTLQRALSES LGEFLPASVV FDYPTVYSLT DYLATVLPEL
LEIGATAVAT QQATDSYHEL TEAELLEQLS ERLRGTQ
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