| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_12848 |
|---|
| Symbol | |
|---|
| ID | 5223534 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium tuberculosis F11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009565 |
|---|
| Strand | - |
|---|
| Start bp | 3150812 |
|---|
| End bp | 3152122 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640607614 |
|---|
| Product | sn-glycerol-3-phosphate-binding lipoprotein ugpB |
|---|
| Protein accession | YP_001288777 |
|---|
| Protein GI | 148824023 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 219 |
|---|
| Plasmid unclonability p-value | 0.0000000142723 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 235 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCCGC TGAACCGCCG ACAATTCCTC GCGCTGGCCG CTGCCGCCGC CGGCGTGACC
GCCGGCTGCG CCGGGATGGG CGGCGGCGGT TCGGTGAAGT CCGGTTCCGG CCCAATCGAC
TTCTGGTCCA GTCATCCCGG CCAATCCAGC GCGGCGGAAC GGGAGCTGAT CGGTCGTTTC
CAGGACCGAT TCCCCACTCT GTCGGTCAAG CTGATCGACG CCGGCAAGGA CTACGACGAG
GTGGCACAGA AATTCAATGC GGCGCTCATC GGAACCGACG TGCCCGACGT CGTTTTGCTC
GACGACCGAT GGTGGTTCCA TTTCGCCCTC AGCGGTGTTC TCACTGCCCT TGACGACCTG
TTCGGCCAAG TTGGGGTGGA CACAACGGAT TACGTCGATT CGCTGCTGGC CGACTATGAG
TTCAACGGCC GCCATTACGC TGTGCCGTAT GCTCGCTCGA CGCCGCTGTT CTACTACAAC
AAGGCGGCGT GGCAACAGGC CGGCCTACCC GACCGCGGAC CGCAATCCTG GTCAGAGTTC
GACGAGTGGG GTCCGGAGTT ACAGCGCGTG GTCGGCGCCG GTCGATCGGC GCACGGCTGG
GCTAACGCCG ACCTCATCTC GTGGACGTTT CAGGGACCGA ACTGGGCATT CGGCGGTGCC
TACTCCGACA AGTGGACATT GACATTGACC GAGCCCGCCA CGATCGCGGC CGGCAACTTC
TATCGGAACT CCATCCATGG CAAGGGTTAT GCGGCGGTCG CCAACGATAT TGCCAACGAG
TTCGCCACCG GAATCCTGGC CTCGGCCGTG GCATCCACCG GCTCGCTGGC CGGCATCACC
GCATCTGCCC GATTCGACTT CGGCGCCGCA CCGCTGCCCA CGGGCCCGGA CGCAGCGCCC
GCCTGTCCGA CGGGCGGTGC GGGGCTGGCG ATACCGGCCA AGCTCTCCGA GGAGCGAAAA
GTCAACGCGC TCAAGTTCAT CGCATTCGTC ACCAACCCGA CGAACACCGC CTACTTCAGC
CAGCAAACCG GCTATCTGCC GGTGCGCAAG TCCGCCGTCG ACGATGCCAG CGAACGGCAC
TATCTGGCGG ACAATCCCCG TGCGCGGGTG GCGCTCGACC AGCTGCCACA CACCCGGACA
CAAGACTACG CACGGGTTTT CCTGCCCGGT GGTGACCGGA TCATCTCCGC CGGCCTGGAA
TCCATCGGGC TGCGCGGAGC CGACGTGACC AAGACCTTCA CGAACATCCA AAAACGGTTG
CAGGTCATCC TGGATCGGCA GATCATGCGG AAGCTGGCGG GGCATGGCTA A
|
|---|
| Protein sequence | MDPLNRRQFL ALAAAAAGVT AGCAGMGGGG SVKSGSGPID FWSSHPGQSS AAERELIGRF
QDRFPTLSVK LIDAGKDYDE VAQKFNAALI GTDVPDVVLL DDRWWFHFAL SGVLTALDDL
FGQVGVDTTD YVDSLLADYE FNGRHYAVPY ARSTPLFYYN KAAWQQAGLP DRGPQSWSEF
DEWGPELQRV VGAGRSAHGW ANADLISWTF QGPNWAFGGA YSDKWTLTLT EPATIAAGNF
YRNSIHGKGY AAVANDIANE FATGILASAV ASTGSLAGIT ASARFDFGAA PLPTGPDAAP
ACPTGGAGLA IPAKLSEERK VNALKFIAFV TNPTNTAYFS QQTGYLPVRK SAVDDASERH
YLADNPRARV ALDQLPHTRT QDYARVFLPG GDRIISAGLE SIGLRGADVT KTFTNIQKRL
QVILDRQIMR KLAGHG
|
|---|
| |