| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_12718 |
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| Symbol | |
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| ID | 5223404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium tuberculosis F11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009565 |
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| Strand | + |
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| Start bp | 3029790 |
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| End bp | 3031376 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640607484 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_001288647 |
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| Protein GI | 148823893 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 336 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 216 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAGCGA CCAAAGCAAG CACGGCGACC GATGAGCCGG TAAAACGCAC CGCCACCAAG
TCGCCCGCGG CTTCCGCGTC CGGGGCCAAG ACCGGCGCCA AGCGAACAGC GGCGAAGTCC
GCTAGTGGCT CCCCACCCGC GAAGCGGGCT ACCAAGCCCG CGGCCCGGTC CGTCAAGCCC
GCCTCGGCAC CCCAGGACAC TACGACCAGC ACCATCCCGA AAAGGAAGAC CCGCGCCGCG
GCCAAATCCG CCGCCGCGAA GGCACCGTCG GCCCGCGGCC ACGCGACCAA GCCACGGGCG
CCCAAGGATG CCCAGCACGA AGCCGCAACG GATCCCGAGG ACGCCCTGGA CTCCGTCGAG
GAGCTCGACG CTGAACCAGA CCTCGACGTC GAGCCCGGCG AGGACCTCGA CCTTGACGCC
GCCGACCTCA ACCTCGATGA CCTCGAGGAC GACGTGGCGC CGGACGCCGA CGACGACCTC
GACTCGGGCG ACGACGAAGA CCACGAAGAC CTCGAAGCTG AGGCGGCCGT CGCGCCCGGC
CAGACCGCCG ATGACGACGA GGAGATCGCT GAACCCACCG AAAAGGACAA GGCCTCCGGT
GATTTCGTCT GGGATGAAGA CGAGTCGGAG GCCCTGCGTC AAGCACGCAA GGACGCCGAA
CTCACCGCAT CCGCCGACTC GGTTCGCGCC TACCTCAAAC AGATCGGCAA GGTAGCGCTG
CTCAACGCCG AGGAAGAGGT CGAGCTAGCC AAGCGGATCG AGGCTGGCCT GTACGCCACG
CAGCTGATGA CCGAGCTTAG CGAGCGCGGC GAAAAGCTGC CTGCCGCCCA GCGCCGCGAC
ATGATGTGGA TCTGCCGCGA CGGCGATCGC GCGAAAAACC ATCTGCTGGA AGCCAACCTG
CGCCTGGTGG TTTCGCTAGC CAAGCGCTAC ACCGGCCGGG GCATGGCGTT TCTCGACCTG
ATCCAGGAAG GCAACCTGGG GCTGATCCGC GCGGTGGAGA AGTTCGACTA CACCAAGGGG
TACAAGTTCT CCACCTACGC TACGTGGTGG ATTCGCCAGG CCATCACCCG CGCCATGGCC
GACCAGGCCC GCACCATCCG CATCCCGGTG CACATGGTCG AGGTGATCAA CAAGCTGGGC
CGCATTCAAC GCGAGCTGCT GCAGGACCTG GGCCGCGAGC CCACGCCCGA GGAGCTGGCC
AAAGAGATGG ACATCACCCC GGAGAAGGTG CTGGAAATCC AGCAATACGC CCGCGAGCCG
ATCTCGTTGG ACCAGACCAT CGGCGACGAG GGCGACAGCC AGCTTGGCGA TTTCATCGAA
GACAGCGAGG CGGTGGTGGC CGTCGACGCG GTGTCCTTCA CTTTGCTGCA GGATCAACTG
CAGTCGGTGC TGGACACGCT CTCCGAGCGT GAGGCGGGCG TGGTGCGGCT ACGCTTCGGC
CTTACCGACG GCCAGCCGCG CACCCTTGAC GAGATCGGCC AGGTCTACGG CGTGACCCGG
GAACGCATCC GCCAGATCGA ATCCAAGACT ATGTCGAAGT TGCGCCATCC GAGCCGCTCA
CAGGTCCTGC GCGACTACCT GGACTGA
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| Protein sequence | MAATKASTAT DEPVKRTATK SPAASASGAK TGAKRTAAKS ASGSPPAKRA TKPAARSVKP
ASAPQDTTTS TIPKRKTRAA AKSAAAKAPS ARGHATKPRA PKDAQHEAAT DPEDALDSVE
ELDAEPDLDV EPGEDLDLDA ADLNLDDLED DVAPDADDDL DSGDDEDHED LEAEAAVAPG
QTADDDEEIA EPTEKDKASG DFVWDEDESE ALRQARKDAE LTASADSVRA YLKQIGKVAL
LNAEEEVELA KRIEAGLYAT QLMTELSERG EKLPAAQRRD MMWICRDGDR AKNHLLEANL
RLVVSLAKRY TGRGMAFLDL IQEGNLGLIR AVEKFDYTKG YKFSTYATWW IRQAITRAMA
DQARTIRIPV HMVEVINKLG RIQRELLQDL GREPTPEELA KEMDITPEKV LEIQQYAREP
ISLDQTIGDE GDSQLGDFIE DSEAVVAVDA VSFTLLQDQL QSVLDTLSER EAGVVRLRFG
LTDGQPRTLD EIGQVYGVTR ERIRQIESKT MSKLRHPSRS QVLRDYLD
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