Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_12611 |
Symbol | |
ID | 5223293 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | + |
Start bp | 2934868 |
End bp | 2936499 |
Gene Length | 1632 bp |
Protein Length | 543 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640607373 |
Product | PE-PGRS family protein |
Protein accession | YP_001288540 |
Protein GI | 148823786 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 264 |
Plasmid unclonability p-value | 0.0987331 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 213 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGTTTG TCACGGCAGC TCCAGAGATG CTGGCGACGG CGGCGCAGAA TGTCGCGAAT ATCGGCACAT CGCTGAGTGC GGCAAACGCG ACGGCAGCGG CGTCCACGAC CTCGGTGCTG GCGGCCGGAG CCGACGAGGT ATCGCAGGCT ATCGCAAGGC TGTTCAGTGA TTACGCCACG CACTATCAGT CGCTGAACGC TCAAGCCGCG GCATTTCATC ACAGCTTCGT GCAAACGTTG AACGCCGCCG GTGGCGCCTA TTCGAGCGCC GAGGCGGCCA ACGCTTCGGC GCAGGCGTTG GAACAGAATC TGTTGGCCGT GATCAATGCG CCCGCCCAGG CGTTGTTCGG GCGTCCCCTG ATCGGCAATG GCGCGAATGG AACAGCGGCC AGCCCCAACG GCGGTGATGG TGGGATTTTG TACGGCAACG GCGGCAACGG CTTCTCCCAA ACGACCGCCG GGGTGGCCGG CGGCGCCGGT GGTTCCGCGG GCCTGATCGG CAACGGCGGC AATGGTGGCG CCGGTGGGGC CGGTGCTGCC GGCGGGGCCG GCGGCGCCGG CGGATGGCTG CTCGGCAACG GTGGCGCCGG CGGTCCCGGC GGCCCAACGG ACGTTCCTGC CGGCACAGGT GGAGCCGGCG GGGCCGGCGG CGACGCCCCA TTGATCGGCT GGGGCGGCAA CGGCGGGCCC GGCGGTTTCG CTGCTTTTGG AAACGGTGGG GCCGGCGGCA ACGGCGGCGC CAGCGGTTCG CTCTTTGGCG TCGGCGGCGC CGGCGGCGTC GGCGGATCGA GCGAAGACGT CGGCGGCACC GGCGGGGCCG GCGGCGCTGG CCGCGGTCTA TTCCTTGGCC TGGGCGGTGA TGGCGGCGCC GGCGGCACCA GCAACAACAA CGGCGGTGAC GGTGGCGCCG GCGGCACCGC GGGAGGTCGA TTGTTCAGCC TGGGCGGTGA CGGTGGCAAC GGTGGTGCCG GTACCGCAAT CGGATCCAAC GCCGGTGACG GTGGCGCCGG CGGTGACAGC AGCGCCCTGA TCGGCTACGC CCAGGGCGGC TCCGGCGGCC TCGGCGGCTT CGGCGAAAGT ACCGGCGGCG ACGGCGGCCT GGGCGGCGCC GGCGCTGTGC TCATCGGCAC GGGCGTCGGC GGTTTCGGCG GCCTCGGTGG CGGCTCCAAC GGCACCGGGG GCGCGGGCGG CGCGGGCGGC ACGGGCGCCA CGCTGATCGG CCTGGGCGCC GGCGGCGGCG GCGGCATCGG CGGGTTCGCC GTCAACGTGG GCAACGGCGT CGGCGGTCTG GGCGGCCAGG GCGGCCAGGG CGCCGCGCTG ATCGGCCTGG GCGCCGGCGG TGCCGGCGGT GCCGGCGGCG CCACAGTCGT TGGACTTGGT GGCAATGGCG GTGACGGCGG TGACGGTGGC GGCCTGTTTA GTATCGGCGT CGGTGGGGAC GGCGGCAACG CCGGCAACGG CGCCATGCCT GCCAATGGCG GCAACGGCGG CAACGCCGGG GTCATTGCCA ACGGCTCCTT TGCCCCGTCG TTCGTCGGCT TCGGCGGCAA CGGCGGCAAC GGCGTCAATG GCGGCACCGG CGGCAGCGGC GGGATCCTTT TTGGCGCCAA CGGCGCGAAC GGACCGTCGT AG
|
Protein sequence | MSFVTAAPEM LATAAQNVAN IGTSLSAANA TAAASTTSVL AAGADEVSQA IARLFSDYAT HYQSLNAQAA AFHHSFVQTL NAAGGAYSSA EAANASAQAL EQNLLAVINA PAQALFGRPL IGNGANGTAA SPNGGDGGIL YGNGGNGFSQ TTAGVAGGAG GSAGLIGNGG NGGAGGAGAA GGAGGAGGWL LGNGGAGGPG GPTDVPAGTG GAGGAGGDAP LIGWGGNGGP GGFAAFGNGG AGGNGGASGS LFGVGGAGGV GGSSEDVGGT GGAGGAGRGL FLGLGGDGGA GGTSNNNGGD GGAGGTAGGR LFSLGGDGGN GGAGTAIGSN AGDGGAGGDS SALIGYAQGG SGGLGGFGES TGGDGGLGGA GAVLIGTGVG GFGGLGGGSN GTGGAGGAGG TGATLIGLGA GGGGGIGGFA VNVGNGVGGL GGQGGQGAAL IGLGAGGAGG AGGATVVGLG GNGGDGGDGG GLFSIGVGGD GGNAGNGAMP ANGGNGGNAG VIANGSFAPS FVGFGGNGGN GVNGGTGGSG GILFGANGAN GPS
|
| |