Gene TBFG_12489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_12489 
Symbol 
ID5223168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp2781533 
End bp2782339 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content67% 
IMG OID640607248 
ProductDNA glycosylase 
Protein accessionYP_001288418 
Protein GI148823664 
COG category[L] Replication, recombination and repair 
COG ID[COG0266] Formamidopyrimidine-DNA glycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones439 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones206 
Fosmid unclonability p-value0.604006 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTGAGG GGCATACGCT GCATCGGCTG GCCCGGCTGC ACCAGCGCCG GTTCGCCGGT 
GCGCCGGTCT CGGTGTCCAG CCCCCAGGGC CGGTTCGCCG ATTCGGCTTC CGCGCTCAAC
GGTCGGGTGT TGCGGCGGGC CAGTGCCTGG GGCAAACACC TGTTCCATCA CTACGTCGGC
GGCCCCGTGG TGCACGTGCA TCTCGGGCTC TATGGCACCT TCACCGAATG GGCACGCCCC
ACAGATGGGT GGCTACCCGA ACCCGCGGGG CAGGTGCGGA TGCGGATGGT CGGGGCAGAA
TTCGGCACCG ACTTGCGCGG CCCGACGGTG TGTGAGTCGA TCGACGACGG CGAGGTTGCG
GACGTGGTTG CCAGGCTGGG ACCCGACCCG TTGCGTAGCG ACGCCAACCC GTCGTCGGCA
TGGTCTCGGA TCACCAAGTC TCGCAGGCCC ATAGGCGCGC TCTTGATGGA CCAAACGGTG
ATCGCCGGTG TTGGCAACGT CTACCGTAAT GAGTTGCTTT TTCGGCACCG GATCGACCCA
CAGCGGCCCG GCCGCGGGAT CGGTGAGCCG GAATTCGACG CGGCCTGGAA CGATCTGGTG
TCGTTGATGA AGGTGGGCTT GCGCCGCGGC AAGATCATCG TGGTGCGCCC CGAACATGAC
CATGGTCTGC CGTCATATCT GCCCGACCGG CCCCGCACCT ATGTGTACCG CCGAGCCGGC
GAGCCGTGTC GGGTGTGTGG GGGAGTGATC CGCACGGCAC TGCTCGAGGG CCGCAATGTT
TTCTGGTGCC CGGTCTGTCA GACCTGA
 
Protein sequence
MPEGHTLHRL ARLHQRRFAG APVSVSSPQG RFADSASALN GRVLRRASAW GKHLFHHYVG 
GPVVHVHLGL YGTFTEWARP TDGWLPEPAG QVRMRMVGAE FGTDLRGPTV CESIDDGEVA
DVVARLGPDP LRSDANPSSA WSRITKSRRP IGALLMDQTV IAGVGNVYRN ELLFRHRIDP
QRPGRGIGEP EFDAAWNDLV SLMKVGLRRG KIIVVRPEHD HGLPSYLPDR PRTYVYRRAG
EPCRVCGGVI RTALLEGRNV FWCPVCQT