| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_12423 |
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| Symbol | |
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| ID | 5223100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium tuberculosis F11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009565 |
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| Strand | + |
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| Start bp | 2704725 |
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| End bp | 2706728 |
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| Gene Length | 2004 bp |
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| Protein Length | 667 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640607180 |
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| Product | integral membrane protein |
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| Protein accession | YP_001288352 |
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| Protein GI | 148823598 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1297] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00728] oligopeptide transporters, OPT superfamily
[TIGR00733] putative oligopeptide transporter, OPT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 211 |
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| Plasmid unclonability p-value | 0.00332711 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 221 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGGTG CCACGGTGGG TGCGCGCGAA ATCACCATCC GCGGAGTCGT CCTGGGCGCA
TTGATTACCT TGGTGTTCAC CGCGGCCAAC GTGTACCTGG GGCTAAGGGT TGGATTGACA
TTCGCCACTT CCATACCGGC CGCGGTGATC TCGATGGGCG TGCTGCGGTT GTTCGCCAAC
CACTCAGTGG TGGAGAACAA TATTGTTCAG ACGATCGCGT CGGCGGCCGG CACGCTGTCG
TCGATCATCT TCGTGTTACC GGCACTGCTC ATGATCGGCT GGTGGAGCGG GTTTCCGTAC
TGGACAACGG CGGCGGTGTG TGCACTGGGC GGGATCCTTG GCGTCATGTA CTCAATTCCG
TTGCGCCGCG CACTCGTCAC CGGATCAGAC CTGCCGTACC CAGAAGGCGT TGCCGGAGCC
GAGGTTCTCA AGATCGGTGA CTCCGCACGG GAGATGGAGC ACAACCGTAG GGGAATTGGG
GTAATCGCCC TGGGCGCGGC AGCGGCGGCG GGATATGCAC TGCTGGCATC CCTGCGGGTG
ATCAACAACT CACTGTCGGC CACCTTCCGA GTAGGTTCCG GTGCGACGAT GATCGGTGCC
AGCTTGTCGC TGGCGTTGAT CGGCGTCGGT CATCTTGTTG GCGTCACCGT CGGTGTCGCA
ATGATCGTCG GATTGGCTAT CGCCTTTGGG GTAATGCTGC CAATACGGAC AGCCGGCCAA
CTGCCGCCGG ACGGGGACTA CGCCGTCGCC GTCGCCAGAA TTTTCTCGAC GGACGTGCGG
TTCATCGGGG CGGGCGCCAT TGCGGTGGCG GCCGCCTGGA CGTTCTTGAA GATCCTGGGG
CCGATTCTGC GTGGCATCGC CGACGCCGCG GTCTCAGCTC GAACCCGACG CCGAGGGCAA
GCGGTTGGCC AGACCGAGCG CGACATCCCG ATCCACATCG TGGCCATGGT GGTTCTTCTC
TCGCTGATCC CAATCGGATG GCTGCTCGCG GACTTTACCG ACGGGACACC GCTCGATGAC
CGCAGGCCCG GCGCCATCGC CGCCGGGGTA CTGCTCGTCT TGGTCATCGG GTTGATGGTC
GCTGCGGTCT GCGGTTACAT GGCCGGGTTG ATCGGCTCGT CGAACAGCCC GATCTCGGGC
GTGGGCATTC TGGTGGTGGT GCTGGCCGGT CTGCTGATCA AGACTGCGTA TGGTCCGGCC
ACCGGCTCGC AGATTCCGGC CCTGGTGGCC TACACCGTGT TTACCGCTGC ATTGGTCTTC
GGCGTGGCGA CTATTTCCAA CGACAATCTG CAGGACCTCA AAACCGGCCA ACTCGTCGGC
GCTACCCCAT GGAAGCAGCA GGTTGCACTG ATCATCGGCG TGCTCGTCGG GTCGGTGGTG
ATGGCGCCGA TCCTGCAGCT GATGCAGGCT GGATTCGGGT TCCAGGGGGC GCCGGGCGCA
ACGGCCAACG CATTGGCCGC CCCGCAAGCC GCGCTCATGT CCGCGCTGGC CAAGGGAGTA
TTTGGTGGCT CGCTGAACTG GTCGCTGGTC GGTGTAGGGG CCTTGACCGG CGTGATAGCG
GTCGCGCTCG ACGAGACACT GGCCAAGACG ACAACCAACC TTCGGCTGCC GCCACTAGCG
GTGGGTATGG GTATGTACCT GTCGGCCGCA CTGACGCTGA TGATCCCGAT CGGCGCATTC
CTCGGGCGGA TCTATGACTC CTGGGCGCGG TGGTCTGGGG ATGACGACGA GCGCAAGAAA
CGGTTGGGCG TCATGCTCGC GACGGGCCTG ATTGTGGGCG AAAGCCTATA CGGGGTGCTC
TTTGCCGTCA TCGTCGCGAC AACTGGCAAA GAGGAGCCGC TGGCCATGGT CGGCGACGGA
TTCAGGTTTG CCTCCCAGCC GCTGGGAGCC ATCGTCTTTG CCGGCCTCCT CGCTTGGCTC
TACCAGCGCA CCCGGGTCAC AGCGTCGTAC CGGCTGGCAG CGCCGGCCGG CAGCTCCAAG
CCACTGCCCG ATTTGCCTGG GTAA
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| Protein sequence | MSGATVGARE ITIRGVVLGA LITLVFTAAN VYLGLRVGLT FATSIPAAVI SMGVLRLFAN
HSVVENNIVQ TIASAAGTLS SIIFVLPALL MIGWWSGFPY WTTAAVCALG GILGVMYSIP
LRRALVTGSD LPYPEGVAGA EVLKIGDSAR EMEHNRRGIG VIALGAAAAA GYALLASLRV
INNSLSATFR VGSGATMIGA SLSLALIGVG HLVGVTVGVA MIVGLAIAFG VMLPIRTAGQ
LPPDGDYAVA VARIFSTDVR FIGAGAIAVA AAWTFLKILG PILRGIADAA VSARTRRRGQ
AVGQTERDIP IHIVAMVVLL SLIPIGWLLA DFTDGTPLDD RRPGAIAAGV LLVLVIGLMV
AAVCGYMAGL IGSSNSPISG VGILVVVLAG LLIKTAYGPA TGSQIPALVA YTVFTAALVF
GVATISNDNL QDLKTGQLVG ATPWKQQVAL IIGVLVGSVV MAPILQLMQA GFGFQGAPGA
TANALAAPQA ALMSALAKGV FGGSLNWSLV GVGALTGVIA VALDETLAKT TTNLRLPPLA
VGMGMYLSAA LTLMIPIGAF LGRIYDSWAR WSGDDDERKK RLGVMLATGL IVGESLYGVL
FAVIVATTGK EEPLAMVGDG FRFASQPLGA IVFAGLLAWL YQRTRVTASY RLAAPAGSSK
PLPDLPG
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