Gene TBFG_12262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_12262 
Symbol 
ID5222938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp2518424 
End bp2519299 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content68% 
IMG OID640607018 
Producthypothetical protein 
Protein accessionYP_001288195 
Protein GI148823441 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones380 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones217 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTTCGC CTCGTGAACG CCGACCCGCT TCGCAGGCGC CCAGACTTTC GCGTCGACCA 
CCTGCTCACC AAACTTCGCG ATCATCGCCT GATACCACAG CGCCAACGGG TAGCGGTTTG
TCCAACCGCT TCGTCAACGA CAATGGGATC GTGACCGACA CGACCGCGAG CGGGACCAAT
TGCCCGCCTC CTCCACGCGC CGCCGCACGG CGCGCATCGT CGCCGGGTGA ATCGCCGCAG
CTGGTGATCT TCGATCTGGA CGGCACGCTG ACCGACTCGG CGCGCGGAAT CGTATCCAGC
TTCCGACACG CGCTCAACCA CATCGGTGCC CCAGTACCCG AAGGCGACCT GGCCACTCAC
ATCGTCGGCC CGCCCATGCA TGAGACGCTG CGCGCCATGG GGCTCGGCGA ATCCGCCGAG
GAGGCGATCG TAGCCTACCG GGCCGACTAC AGCGCCCGCG GTTGGGCGAT GAACAGCTTG
TTCGACGGGA TCGGGCCGCT GCTGGCCGAC CTGCGCACCG CCGGTGTCCG GCTGGCCGTC
GCCACCTCCA AGGCAGAGCC GACCGCACGG CGAATCCTGC GCCACTTCGG AATTGAGCAG
CACTTCGAGG TCATCGCGGG CGCGAGCACC GATGGCTCGC GAGGCAGCAA GGTCGACGTG
CTGGCCCACG CGCTCGCGCA GCTGCGGCCG CTACCCGAGC GGTTGGTGAT GGTCGGCGAC
CGCAGCCACG ACGTCGACGG GGCGGCCGCG CACGGCATCG ACACGGTGGT GGTCGGCTGG
GGCTACGGGC GCGCCGACTT TATCGACAAG ACCTCCACCA CCGTCGTGAC GCATGCCGCC
ACGATTGACG AGCTGAGGGA GGCGCTAGGT GTCTGA
 
Protein sequence
MSSPRERRPA SQAPRLSRRP PAHQTSRSSP DTTAPTGSGL SNRFVNDNGI VTDTTASGTN 
CPPPPRAAAR RASSPGESPQ LVIFDLDGTL TDSARGIVSS FRHALNHIGA PVPEGDLATH
IVGPPMHETL RAMGLGESAE EAIVAYRADY SARGWAMNSL FDGIGPLLAD LRTAGVRLAV
ATSKAEPTAR RILRHFGIEQ HFEVIAGAST DGSRGSKVDV LAHALAQLRP LPERLVMVGD
RSHDVDGAAA HGIDTVVVGW GYGRADFIDK TSTTVVTHAA TIDELREALG V