Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_12098 |
Symbol | cobN |
ID | 5222773 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | - |
Start bp | 2331781 |
End bp | 2335365 |
Gene Length | 3585 bp |
Protein Length | 1194 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640606853 |
Product | cobaltochelatase subunit CobN |
Protein accession | YP_001288031 |
Protein GI | 148823277 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1429] Cobalamin biosynthesis protein CobN and related Mg-chelatases |
TIGRFAM ID | [TIGR02257] cobaltochelatase, CobN subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 82 |
Plasmid unclonability p-value | 0.000146421 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 204 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGGAAC CGACCGTTCT GCTGTTGTCG ACGTCCGACA CCGACCTGAT TAGCGCCCGG TCCAGCGGCA AGAACTACCG GTGGGCGAAT CCCTCGCGGC TGTCTGACCT GGAACTGACC GACCTGCTGG CCGAAGCGTC GATCGTGGTG ATCCGGATTC TCGGCGGCTA CCGCGCCTGG CAGAGCGGAA TCGACACGGT GATCGCCGGC GGGGTACCGG CCGTACTGGT CAGCGGAGAG CAGGCCGCCG ATGCCGAGTT GACCGACCGC TCCACGGTCG CGGCCGGCAC CGCGCTGCAG GCCCACATCT ACCTGGCCCA CGGCGGCGTC GACAACCTGC GCGAGTTGCA CGCCTTCCTG TGCGACACCG TGCTGATGAC CGGCTTCGGG TTCACGCCGC CGGTCGCCAC CCCGACCTGG GGGGTGCTGG AGCGTCCGGA CGCCGGCAAG ACCGGCCCGA CGATCGCGGT GCTCTACTAC CGTGCCCAGC ACCTGGCCGG CAACACCGGC TACGTCGAGG CGCTGTGCCG GGCGATCGAA GACGCCGGCG GACGCCCGCT GCCGCTCTAC TGCGCGTCGC TGCGCACCGC CGAGCCGCGG CTGCTGGAAA GGCTCGGCGG CGCCGACGCC ATGGTGGTCA CCGTGCTGGC CGCCGGGGGA GTCAAGCCGG CCGCCGCCTC GGCCGGCGGC GACGATGACA GCTGGAACGT TGAGCACCTG GCGGCGCTGG ACATCCCGAT CCTGCAAGGC CTGTGTTTGA CTAGCCCGCG GGATCAGTGG TGCGCCAACG ACGACGGCCT GTCGCCGCTG GACGTGGCCA GCCAGGTGGC GGTGCCCGAG TTCGACGGCC GCATCATCAC GGTTCCGTTC TCGTTCAAGG AGATTGACGA CGACGGGCTG ATCTCCTATG TGGCCGACCC GGAGCGCTGC GCCCGGGTCG CGGGCCTGGC GGTCCGGCAC GCACGGCTGC GCCAGGTCGC CCCCGCCGAC AAGCGGGTGG CCCTGGTCTT CTCGGCCTAC CCGACCAAAC ACGCCCGCAT CGGCAACGCG GTGGGCCTGG ACACCCCGGC CAGCGCGGTG GCCTTGCTGC AAGCGATGCG GCAGCGCGGA TATCGGGTGG GTGATCTGCC GGGTGTCGAA TCAAACGACG GCGACGCGCT GATTCACGCG TTGATCGAAT GCGGCGGACA CGACCCCGAC TGGCTCACCG AAGGCCAGCT GGCCGGCAAC CCCATCCGGG TGTCGGCCAA GGAGTATCGG GACTGGTTCG CCACCCTGCC CGCCGAACTG ACAGACGTGG TAACAGCGTA CTGGGGCCCG CCACCCGGTG AGCTGTTCGT CGACCGTAGC CACGACCCGG ACGGCGAGAT CGTCATCGCC GCACTGCGAG CGGGCAACCT GGTGCTCATG GTTCAGCCGC CGCGCGGCTT CGGGGAGAAC CCGGTGGCGA TCTACCACGA CCCGGACCTG CCGCCCAGCC ACCACTACCT GGCCGCCTAC CGCTGGCTCG ATACCGGATT CTCGAACGGT TTCGGGGCGC ACGCCGTGGT GCATTTGGGC AAGCACGGCA ACCTGGAATG GTTGCCGGGA AAGACGCTGG GCATGTCGGC GTCCTGCGGA CCCGACGCCG CGCTGGGCGA TCTGCCGCTG ATCTACCCGT TTCTGGTTAA CGACCCCGGC GAGGGCACCC AGGCCAAGCG GCGCGCGCAC GCGGTGCTAG TCGACCATTT GATTCCTCCG ATGGCCCGCG CCGAAACCTA CGGCGACATC GCGCGTTTGG AACAGTTGCT CGACGAGCAT GCCAGCGTCG CCGCGCTGGA TCCCGGCAAG CTGCCCGCCA TCCGCCAGCA GATCTGGACG CTGATCCGCG CCGCCAAGAT GGACCACGAC CTGGGACTGA CCGAACGCCC GGAAGAGGAC TCGTTCGACG ACATGCTGCT ACACGTCGAC GGCTGGCTGT GCGAGATCAA GGACGTCCAG ATCCGCGACG GGCTGCACAT CCTCGGGCAA AACCCAACGG GGGAGCAAGA ACTCGACCTG GTGCTGGCCA TCTTGCGGGC CCGCCAGCTG TTCGGCGGCG CGCACGCGAT CCCCGGCCTG CGGCAGGCAC TCGGCCTGGC CGAGGATGGC ACCGACGAAC GCGCGACAGT CGACCAGACC GAGGCGAAAG CCCGCGAACT GGTCGCGGCC CTGCAGGCCA CCGGCTGGGA CCCCTCCGCC GCCGACCGAC TCACCGGCAA CGCCGACGCC GCCGCGGTGC TGCGGTTCGC CGCCACCGAA GTGATACCCC GGTTGGCTGG CACCGCAACC GAAATCGAGC AGGTGCTAAG AGCTTTGGAC GGCCGGTTCA TCCCGGCCGG GCCGTCGGGG TCGCCGCTGC GCGGCCTGGT CAACGTGCTA CCCACCGGGC GCAACTTCTA CTCCGTGGAT CCCAAGGCGG TGCCGTCCCG GCTGGCGTGG GAAGCCGGTG TGGCACTGGC CGATTCGCTG CTGGCGCGCT ACCGCGATGA GCATGGGCGG TGGCCGCGGT CGGTGGGGCT GTCGGTGTGG GGCACCTCGG CGATGCGCAC GGCCGGCGAC GACATCGCCG AAGTGCTTGC GCTGCTGGGG GTTCGGCCGG TATGGGACGA CGCCTCGCGG CGGGTCATCG ACCTGGCGCC CATGCAGCCG GCCGAGCTGG GCCGCCCGCG CATCGACGTG ACGGTACGGA TCTCCGGCTT TTTCCGTGAT GCCTTCCCGC ATGTGGTGAC CATGCTCGAT GACGCGGTGC GGTTGGTCGC CGACCTCGAC GAGGCCGCCG AGGACAACTA CGTGCGCGCG CACGCCCAAG CGGATCTGGC CCACCACGGA GATCAACGGC GAGCCACCAC AAGGATTTTC GGATCCAAAC CGGGAACCTA CGGCGCCGGG CTGCTGCAGC TGATCGACAG CCGCAGCTGG CGCGACGACG CCGACCTCGC CCAGGTGTAC ACCGCCTGGG GCGGATTCGC CTACGGGCGC GACCTGGATG GCCGCGAGGC GATCGACGAC ATGAACCGCC AGTACCGGCG TATTGCGGTG GCCGCCAAGA ATACCGACAC CCGTGAACAC GACATCGCCG ACTCCGACGA CTACTTCCAG TATCACGGCG GCATGGTGGC CACCGTGCGG GCGCTCACGG GCCAAGCACC GGCCGCCTAT ATCGGCGACA ACACCCGACC CGACGCGATC CGCACCCGCA CGCTGTCGGA GGAGACCACG CGGGTGTTTC GCGCCCGCGT GGTCAATCCG AGGTGGATGG CCGCGATGCG CCGGCACGGC TACAAGGGCG CATTCGAGAT GGCGGCCACC GTCGACTATC TGTTCGGTTA TGACGCCACC GCCGGGGTGA TGGCGGACTG GATGTACGAG CAGCTCACGC AGCGTTACGT CCTGGACGCG CAGAACCGCA CGTTCATGAC CGAGTCCAAC CCGTGGGCGC TGCACGGCAT GGCCGAACGG CTGTTGGAAG CGGCCGGTCG CGGCCTGTGG GCACAGCCGG CACCGGAAAC CCTGGACGGG TTGCGCCAGG TGCTGCTGGA AACCGAGGGC GACCTGGAAG CCTGA
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Protein sequence | MPEPTVLLLS TSDTDLISAR SSGKNYRWAN PSRLSDLELT DLLAEASIVV IRILGGYRAW QSGIDTVIAG GVPAVLVSGE QAADAELTDR STVAAGTALQ AHIYLAHGGV DNLRELHAFL CDTVLMTGFG FTPPVATPTW GVLERPDAGK TGPTIAVLYY RAQHLAGNTG YVEALCRAIE DAGGRPLPLY CASLRTAEPR LLERLGGADA MVVTVLAAGG VKPAAASAGG DDDSWNVEHL AALDIPILQG LCLTSPRDQW CANDDGLSPL DVASQVAVPE FDGRIITVPF SFKEIDDDGL ISYVADPERC ARVAGLAVRH ARLRQVAPAD KRVALVFSAY PTKHARIGNA VGLDTPASAV ALLQAMRQRG YRVGDLPGVE SNDGDALIHA LIECGGHDPD WLTEGQLAGN PIRVSAKEYR DWFATLPAEL TDVVTAYWGP PPGELFVDRS HDPDGEIVIA ALRAGNLVLM VQPPRGFGEN PVAIYHDPDL PPSHHYLAAY RWLDTGFSNG FGAHAVVHLG KHGNLEWLPG KTLGMSASCG PDAALGDLPL IYPFLVNDPG EGTQAKRRAH AVLVDHLIPP MARAETYGDI ARLEQLLDEH ASVAALDPGK LPAIRQQIWT LIRAAKMDHD LGLTERPEED SFDDMLLHVD GWLCEIKDVQ IRDGLHILGQ NPTGEQELDL VLAILRARQL FGGAHAIPGL RQALGLAEDG TDERATVDQT EAKARELVAA LQATGWDPSA ADRLTGNADA AAVLRFAATE VIPRLAGTAT EIEQVLRALD GRFIPAGPSG SPLRGLVNVL PTGRNFYSVD PKAVPSRLAW EAGVALADSL LARYRDEHGR WPRSVGLSVW GTSAMRTAGD DIAEVLALLG VRPVWDDASR RVIDLAPMQP AELGRPRIDV TVRISGFFRD AFPHVVTMLD DAVRLVADLD EAAEDNYVRA HAQADLAHHG DQRRATTRIF GSKPGTYGAG LLQLIDSRSW RDDADLAQVY TAWGGFAYGR DLDGREAIDD MNRQYRRIAV AAKNTDTREH DIADSDDYFQ YHGGMVATVR ALTGQAPAAY IGDNTRPDAI RTRTLSEETT RVFRARVVNP RWMAAMRRHG YKGAFEMAAT VDYLFGYDAT AGVMADWMYE QLTQRYVLDA QNRTFMTESN PWALHGMAER LLEAAGRGLW AQPAPETLDG LRQVLLETEG DLEA
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