| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_11716 |
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| Symbol | xerD |
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| ID | 5222396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium tuberculosis F11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009565 |
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| Strand | + |
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| Start bp | 1921431 |
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| End bp | 1922366 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640606476 |
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| Product | site-specific tyrosine recombinase XerD |
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| Protein accession | YP_001287661 |
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| Protein GI | 148822907 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 442 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 194 |
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| Fosmid unclonability p-value | 0.162629 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACGC TGGCACTGCA ATTGCAGGGC TACCTCGACC ATCTGACGAT CGAACGAGGT
GTCGCGGCAA ACACATTGAG CTCCTACCGA CGTGATCTGC GCCGCTACTC CAAGCACCTG
GAAGAACGAG GGATTACCGA TCTGGCCAAG GTCGGCGAGC ACGACGTCAG CGAGTTCCTG
GTGGCATTGC GGCGCGGGGA TCCTGATTCC GGCACGGCGG CGTTGTCCGC GGTGTCGGCG
GCACGGGCGC TGATCGCGGT GCGCGGGCTG CATCGCTTCG CTGCCGCAGA AGGGCTGGCC
GAACTGGACG TGGCGCGCGC CGTCCGGCCA CCGACGCCGA GCCGGCGATT GCCTAAGAGC
CTGACAATCG ACGAGGTGCT ATCGCTGCTC GAAGGTGCGG GCGGCGATAA ACCGTCCGAC
GGCCCGCTGA CGCTGCGAAA CCGTGCGGTG CTGGAACTGC TGTACTCGAC CGGGGCGCGG
ATCTCCGAGG CCGTCGGCCT TGACCTCGAC GACATCGACA CCCACGCCAG ATCGGTGTTG
TTGCGCGGCA AGGGTGGTAA GCAGCGGCTG GTTCCGGTGG GACGCCCGGC AGTGCACGCG
CTGGACGCCT ATCTGGTGCG GGGACGGCCC GACTTAGCGC GGCGGGGCCG CGGAACGGCG
GCGATCTTTC TCAACGCGCG CGGCGGCCGG TTGTCACGGC AAAGCGCGTG GCAGGTTCTG
CAGGACGCGG CCGAGCGTGC CGGCATCACC GCCGGTGTTT CGCCGCATAT GTTGAGGCAT
TCGTTCGCCA CGCATCTGCT GGAGGGTGGC GCCGATGTCC GGGTGGTGCA GGAATTGCTG
GGGCACGCCT CGGTGACCAC GACGCAGATC TATACCCTGG TCACCGTCCA TGCACTGCGC
GAGGTGTGGG CGGGAGCTCA CCCGCGGGCA CGCTAA
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| Protein sequence | MKTLALQLQG YLDHLTIERG VAANTLSSYR RDLRRYSKHL EERGITDLAK VGEHDVSEFL
VALRRGDPDS GTAALSAVSA ARALIAVRGL HRFAAAEGLA ELDVARAVRP PTPSRRLPKS
LTIDEVLSLL EGAGGDKPSD GPLTLRNRAV LELLYSTGAR ISEAVGLDLD DIDTHARSVL
LRGKGGKQRL VPVGRPAVHA LDAYLVRGRP DLARRGRGTA AIFLNARGGR LSRQSAWQVL
QDAAERAGIT AGVSPHMLRH SFATHLLEGG ADVRVVQELL GHASVTTTQI YTLVTVHALR
EVWAGAHPRA R
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