| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_11496 |
|---|
| Symbol | |
|---|
| ID | 5222175 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium tuberculosis F11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009565 |
|---|
| Strand | - |
|---|
| Start bp | 1660246 |
|---|
| End bp | 1661373 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 640606255 |
|---|
| Product | PE-PGRS family protein |
|---|
| Protein accession | YP_001287441 |
|---|
| Protein GI | 148822687 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 249 |
|---|
| Plasmid unclonability p-value | 0.000000634061 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 184 |
|---|
| Fosmid unclonability p-value | 0.0755488 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCGGAGGT GCCAGATGTC GTTCGTGGTC GCGAATACGG AGTTCGTGTC GGGAGCGGCG
GGGAATCTCG CGCGCCTCGG TTCGATGATT AGCGCGGCCA ACTCGGCCGC GGCGGCCCAG
ACGACCGCTG TCGCGGCCGC AGGCGCCGAT GAGGTGTCGG CGGCGGTCGC GGCGTTGTTC
GGCGCGCACG GCCAGACCTA TCAGGTGCTC AGCGCCCAAG CCGCGGCGTT TCACAGCCAG
TTCGTGCAAG CCCTGTCCGG CGGCGCGCAG GCGTACGCCG CCGCGGAGGC CACCAACTTT
GGCCCCTTGC AGCCGCTATT CGACGTCATC AACGCGCCCA CCCTGGCGCT GTTGAACCGT
CCGCTGATCG GCAACGGCGC CGATGGGACC GCGGCGAACC CCAACGGCCA GGCCGGCGGA
CTCCTGATCG GCAATGGCGG CAACGGCTTC TCGCCCGCTG CCGGCCCCGG CGGCAACGGC
GGCGCCGCCG GACTGCTGGG CCACGGCGGC AACGGCGGCG TGGGCGCCCT GGGCGCCAAC
GGCGGCGCCG GCGGCACCGG CGGGTGGCTG TTCGGCAACG GCGGGGCCGG CGGCAATAGC
GGCGGTGGCG GCGGTGCCGG CGGCATCGGC GGCTCCGCCG TGCTCTTCGG GGCCGGCGGC
GCGGGTGGCA TCAGCCCCAA CGGCATGGGA GCCGGTGGCT CTGGAGGCAA CGGCGGGCTG
TTTTTTGGCA ACGGCGGTGC TGGCGCCAGC AGCTTCCTCG GCGGAGGTGG CGCCGGCGGC
AGGGCCTTCC TGTTCGGCGA CGGTGGTGCC GGCGGGGCAG CCCTATCCGC GGGTAGCGCT
GGGCGTGGCG GCGATGCCGG GTTCTTCTAT GGCAACGGCG GCGCCGGCGG CAGCGGAGCC
GGGGGGGCAT CGAGCGCCCA CGGCGGGGCC GGCGGCCAGG CCGGGTTGTT CGGCAACGGC
GGGGAAGGCG GCGATGGCGG CGCGTTGGGC GGCAACGGCG GCAACGGTGG CAACGCCCAG
CTGATCGGTA ACGGCGGTGA CGGCGGCGAC GGCGGCGGGG CCGGCGCCCC CGGGCTCGGC
GGCAGGGGCG GGCTGCTGCT CGGCCTGCCC GGCGCGAACG GAACATAG
|
|---|
| Protein sequence | MRRCQMSFVV ANTEFVSGAA GNLARLGSMI SAANSAAAAQ TTAVAAAGAD EVSAAVAALF
GAHGQTYQVL SAQAAAFHSQ FVQALSGGAQ AYAAAEATNF GPLQPLFDVI NAPTLALLNR
PLIGNGADGT AANPNGQAGG LLIGNGGNGF SPAAGPGGNG GAAGLLGHGG NGGVGALGAN
GGAGGTGGWL FGNGGAGGNS GGGGGAGGIG GSAVLFGAGG AGGISPNGMG AGGSGGNGGL
FFGNGGAGAS SFLGGGGAGG RAFLFGDGGA GGAALSAGSA GRGGDAGFFY GNGGAGGSGA
GGASSAHGGA GGQAGLFGNG GEGGDGGALG GNGGNGGNAQ LIGNGGDGGD GGGAGAPGLG
GRGGLLLGLP GANGT
|
|---|
| |