Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_11307 |
Symbol | |
ID | 5221984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | - |
Start bp | 1437200 |
End bp | 1439038 |
Gene Length | 1839 bp |
Protein Length | 612 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640606061 |
Product | oligopeptide-transport ATP-binding protein ABC transporter oppD |
Protein accession | YP_001287252 |
Protein GI | 148822498 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism [R] General function prediction only |
COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
Num covering plasmid clones | 346 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 235 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCCCC TGCTCGAGGT GACCGATTTG GCCGTCACCT TCAGGACCGA TGGCGATCCG GTGACCGCGG TGCGCGGGAT CAGCTACCGC GTCGAGCCCG GCGAGGTGGT CGCGATGGTG GGCGAATCGG GTTCAGGTAA GTCCGCAGCG GCGATGGCGG TGGTGGGCCT GCTGCCCGAG TACGCGCAGG TGCGTGGTTC GGTTCGGCTA CAGGGTACCG AACTGTTGGG GCTTGCCGAC AACGCGATGT CCCGGTTTCG AGGCAAGGCG ATCGGCACGG TGTTCCAGGA TCCGATGTCT GCGCTCACCC CTGTCTACAC CGTCGGCGAC CAAATCGCCG AGGCCATCGA GGTGCACCAG CCCCGTGTTG GCAAGAAGGC CGCTCGTCGG CGTGCGGTGG AACTGCTTGA CCTGGTCGGT ATTTCGCAGC CGCAGCGGCG TTCCCGTGCG TTTCCGCATG AGCTTTCAGG TGGCGAACGC CAACGCGTGG TGATCGCCAT CGCGATCGCC AACGATCCCG ACCTGTTGAT CTGTGACGAA CCGACCACGG CGCTCGACGT CACGGTGCAG GCGCAGATCC TCGACGTCCT CAAGGCGGCG CGCGACGTCA CCGGCGCCGG GGTGCTGATC ATCACCCACG ACCTCGGCGT CGTGGCCGAG TTCGCCGACC GGGCGCTGGT GATGTACGCC GGACGGGTCG TCGAGTCGGC CGGGGTGAAT GATCTGTACC GCGATCGCCG GATGCCCTAC ACCGTGGGGC TTTTAGGCTC GGTCCCCCGG CTGGATGCCG CGCAGGGCAC CCGGCTGGTG CCGATACCGG GTGCGCCCCC GTCGCTGGCG GGCTTGGCAC CGGGTTGCCC GTTCGCGCCG CGCTGCCCGC TAGTCATCGA CGAATGCCTT ACCGCGGAAC CCGAATTGCT TGACGTCGCT ACCGATCACC GGGCGGCCTG CATCCGCACC GAGCTGGTCA CCGGGCGCAG CGCCGCCGAC ATCTACCGGG TCAAAACCGA GGCCCGCCCG GCTGCACTCG GCGACGCCTC GGTGGTCGTG CGGGTACGTC ATCTAGTCAA AACCTACCGG CTGGCCAAGG GCGTGGTGCT GCGCCGGGCG ATCGGCGAGG TCCGCGCGGT CGACGGCATC AGTCTCGAAC TCCGGCAGGG CCGCACGTTG GGTATCGTCG GCGAATCCGG TTCGGGCAAG TCGACCACCC TGCACGAGAT CCTGGAGCTG GCTGCGCCGC AATCGGGATC GATCGAAGTC CTCGGCACTG ACGTCGCCAC GCTGGGGACA GCGGAACGCC GATCGCTGCG CCGCGACATC CAGGTGGTCT TCCAAGACCC GGTGGCGTCC TTAGACCCGC GGCTGCCGGT CTTCGATCTG ATTGCCGAAC CATTGCAGGC CAATGGGTTC GGCAAGAACG AGACTCACGC GCGGGTCGCC GAGCTGCTCG ATATCGTCGG ACTGCGCCAC GGCGACGCCA GTCGTTATCC CGCCGAGTTC TCCGGCGGTC AGAAGCAGCG CATCGGCATC GCGCGGGCAC TGGCGCTCCA ACCCAAGATC CTGGCACTCG ACGAACCGGT GTCGGCACTC GATGTCTCCA TTCAGGCCGG GATCATCAAC CTGCTGCTCG ACCTCCAAGA GCAGTTCGGG TTGTCATATT TATTTGTTTC CCACGATCTT TCGGTGGTCA AACACCTCGC CCACCAGGTG GCGGTCATGC TTGCCGGTAC CGTTGTTGAG CAGGGCGACA GTGAGGAGGT CTTCGGCAAT CCGAAACACG AGTACACCAG GCGACTGCTG GGCGCGGTAC CGCAACCGGA TCCGGCCCGT CGTGGCTGA
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Protein sequence | MSPLLEVTDL AVTFRTDGDP VTAVRGISYR VEPGEVVAMV GESGSGKSAA AMAVVGLLPE YAQVRGSVRL QGTELLGLAD NAMSRFRGKA IGTVFQDPMS ALTPVYTVGD QIAEAIEVHQ PRVGKKAARR RAVELLDLVG ISQPQRRSRA FPHELSGGER QRVVIAIAIA NDPDLLICDE PTTALDVTVQ AQILDVLKAA RDVTGAGVLI ITHDLGVVAE FADRALVMYA GRVVESAGVN DLYRDRRMPY TVGLLGSVPR LDAAQGTRLV PIPGAPPSLA GLAPGCPFAP RCPLVIDECL TAEPELLDVA TDHRAACIRT ELVTGRSAAD IYRVKTEARP AALGDASVVV RVRHLVKTYR LAKGVVLRRA IGEVRAVDGI SLELRQGRTL GIVGESGSGK STTLHEILEL AAPQSGSIEV LGTDVATLGT AERRSLRRDI QVVFQDPVAS LDPRLPVFDL IAEPLQANGF GKNETHARVA ELLDIVGLRH GDASRYPAEF SGGQKQRIGI ARALALQPKI LALDEPVSAL DVSIQAGIIN LLLDLQEQFG LSYLFVSHDL SVVKHLAHQV AVMLAGTVVE QGDSEEVFGN PKHEYTRRLL GAVPQPDPAR RG
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