| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_11279 |
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| Symbol | |
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| ID | 5221956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium tuberculosis F11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009565 |
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| Strand | + |
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| Start bp | 1403737 |
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| End bp | 1405428 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640606033 |
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| Product | cold-shock deaD-box protein A deaD (ATP-dependent RNA helicase) |
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| Protein accession | YP_001287224 |
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| Protein GI | 148822470 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 300 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 211 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTTCC CGGAATATTC GCCTGCGGCG TCCGCTGCGA CGTTTGCTGA CCTGCAGATT
CATCCCCGCG TCTTGCGGGC GATCGGCGAC GTCGGTTACG AGTCACCGAC GGCTATCCAG
GCGGCTACGA TCCCGGCGTT GATGGCAGGC TCCGACGTGG TGGGGCTGGC GCAGACCGGC
ACCGGCAAGA CGGCGGCATT TGCGATTCCG ATGCTGTCCA AGATCGACAT CACCAGCAAG
GTGCCCCAGG CGCTGGTGCT GGTGCCCACC CGGGAGCTGG CTCTGCAGGT GGCCGAGGCG
TTCGGCCGCT ACGGTGCCTA TCTGTCGCAA CTCAACGTGC TGCCGATCTA CGGCGGATCG
TCGTATGCCG TGCAACTGGC CGGATTGAGA CGCGGCGCGC AGGTGGTGGT TGGCACCCCC
GGTCGTATGA TAGACCATCT CGAACGGGCG ACCTTGGACC TGTCGCGGGT GGACTTTCTA
GTGCTCGATG AGGCCGATGA GATGCTGACC ATGGGTTTCG CCGACGACGT TGAGCGCATT
CTGTCCGAGA CCCCCGAATA CAAGCAGGTC GCCCTGTTTT CCGCGACCAT GCCGCCGGCG
ATCCGCAAAC TCAGCGCCAA GTATCTGCAC GATCCGTTCG AAGTCACTTG TAAGGCGAAA
ACCGCTGTGG CCGAGAATAT TTCGCAGAGC TACATTCAGG TAGCACGGAA GATGGACGCG
CTCACCAGAG TGCTCGAAGT CGAGCCGTTC GAGGCGATGA TCGTCTTTGT CCGCACCAAG
CAGGCGACCG AGGAGATTGC CGAAAAGCTG CGTGCCCGAG GGTTTTCCGC GGCTGCCATC
AGCGGTGACG TCCCGCAGGC GCAGCGGGAG CGGACCATCA CGGCGCTGCG GGACGGCGAC
ATCGATATCC TGGTCGCCAC CGATGTGGCG GCGCGCGGAC TCGACGTGGA GCGGATATCA
CACGTGCTTA ACTACGACAT CCCGCACGAC ACCGAGTCCT ACGTACACCG GATCGGGCGC
ACCGGCAGGG CCGGGCGTTC GGGAGCCGCG CTGATATTCG TCTCGCCACG GGAGCTTCAC
CTGCTCAAGG CGATCGAAAA GGCTACGCGG CAAACGCTTA CCGAGGCGCA ATTGCCCACC
GTCGAGGATG TCAACACCCA GCGGGTGGCC AAGTTCGCCG ATTCCATCAC CAATGCGCTG
GGCGGTCCGG GAATCGAGCT GTTCCGCCGA CTGGTCGAGG AGTATGAACG CGAGCATGAT
GTCCCGATGG CTGACATCGC CGCGGCACTG GCCGTGCAGT GCCGCGGCGG TGAGGCATTC
CTGATGGCAC CCGACCCGCC GCTTTCGCGG CGCAACCGCG ACCAGCGTCG GGACCGTCCG
CAAAGGCCCA AGCGTAGACC GGACTTGACC ACCTACCGCG TCGCCGTCGG CAAGCGGCAC
AAGATCGGTC CAGGCGCCAT CGTCGGCGCC ATCGCCAATG AGGGTGGGCT GCACCGCAGC
GACTTCGGTC AGATCCGTAT CGGGCCAGAC TTCTCGCTAG TAGAATTGCC GGCGAAGCTG
CCCCGCGCGA CGCTCAAAAA GCTTGCACAG ACCCGTATCT CGGGTGTGCT GATCGACCTT
CGGCCATACC GGCCGCCCGA CGCGGCGCGC CGGCATAATG GCGGCAAACC ACGGCGGAAA
CACGTCGGAT GA
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| Protein sequence | MAFPEYSPAA SAATFADLQI HPRVLRAIGD VGYESPTAIQ AATIPALMAG SDVVGLAQTG
TGKTAAFAIP MLSKIDITSK VPQALVLVPT RELALQVAEA FGRYGAYLSQ LNVLPIYGGS
SYAVQLAGLR RGAQVVVGTP GRMIDHLERA TLDLSRVDFL VLDEADEMLT MGFADDVERI
LSETPEYKQV ALFSATMPPA IRKLSAKYLH DPFEVTCKAK TAVAENISQS YIQVARKMDA
LTRVLEVEPF EAMIVFVRTK QATEEIAEKL RARGFSAAAI SGDVPQAQRE RTITALRDGD
IDILVATDVA ARGLDVERIS HVLNYDIPHD TESYVHRIGR TGRAGRSGAA LIFVSPRELH
LLKAIEKATR QTLTEAQLPT VEDVNTQRVA KFADSITNAL GGPGIELFRR LVEEYEREHD
VPMADIAAAL AVQCRGGEAF LMAPDPPLSR RNRDQRRDRP QRPKRRPDLT TYRVAVGKRH
KIGPGAIVGA IANEGGLHRS DFGQIRIGPD FSLVELPAKL PRATLKKLAQ TRISGVLIDL
RPYRPPDAAR RHNGGKPRRK HVG
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