| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_10945 |
|---|
| Symbol | |
|---|
| ID | 5221619 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium tuberculosis F11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009565 |
|---|
| Strand | - |
|---|
| Start bp | 1037666 |
|---|
| End bp | 1038457 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640605696 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_001286890 |
|---|
| Protein GI | 148822136 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 500 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 239 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCTGG ATATGTTCCG TCTTGACGAC AAGGTTGCCG TCATCACCGG CGGCGGCCGC
GGCCTGGGAG CAGCCATCGC ATTGGCTTTC GCCCAGGCCG GCGCGGATGT CCTCATCGCT
TCACGAACAT CATCCGAGCT TGACGCTGTC GCCGAACAGA TCCGCGCTGC CGGCCGCCGC
GCCCACACCG TTGCCGCCGA TCTGGCCCAT CCCGAGGTGA CCGCGCAGCT GGCTGGTCAG
GCCGTCGGAG CTTTCGGGAA GCTCGACATC GTCGTCAACA ACGTTGGCGG CACCATGCCC
AACACGCTGC TAAGCACCTC GACCAAGGAC CTCGCGGACG CCTTCGCCTT CAACGTGGGC
ACCGCCCACG CGCTGACCGT CGCGGCGGTG CCGTTGATGC TGGAACACTC CGGCGGCGGC
AGCGTGATCA ACATCAGCTC CACCATGGGC CGGCTGGCGG CGCGGGGTTT CGCCGCCTAC
GGCACCGCCA AGGCCGCACT GGCCCACTAC ACCCGGCTGG CGGCGCTGGA CCTGTGCCCA
CGCGTCCGGG TCAATGCGAT CGCGCCGGGT TCCATCCTGA CCTCGGCGCT GGAGGTGGTA
GCCGCCAACG ACGAGCTGCG TGCGCCGATG GAGCAGGCGA CACCACTGCG CCGGCTCGGT
GACCCCGTCG ACATTGCAGC TGCGGCAGTG TATTTGGCCT CTCCGGCGGG CAGCTTCCTG
ACCGGCAAGA CGTTGGAGGT CGACGGCGGA CTCACCTTCC CCAATCTCGA CCTTCCCATT
CCGGACCTGT GA
|
|---|
| Protein sequence | MILDMFRLDD KVAVITGGGR GLGAAIALAF AQAGADVLIA SRTSSELDAV AEQIRAAGRR
AHTVAADLAH PEVTAQLAGQ AVGAFGKLDI VVNNVGGTMP NTLLSTSTKD LADAFAFNVG
TAHALTVAAV PLMLEHSGGG SVINISSTMG RLAARGFAAY GTAKAALAHY TRLAALDLCP
RVRVNAIAPG SILTSALEVV AANDELRAPM EQATPLRRLG DPVDIAAAAV YLASPAGSFL
TGKTLEVDGG LTFPNLDLPI PDL
|
|---|
| |