Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_10716 |
Symbol | rplD |
ID | 5221384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | + |
Start bp | 805223 |
End bp | 805894 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640605461 |
Product | 50S ribosomal protein L4 |
Protein accession | YP_001286661 |
Protein GI | 148821907 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0088] Ribosomal protein L4 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 416 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 199 |
Fosmid unclonability p-value | 0.311364 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTGCGC AAGAGCAGAA GACACTCAAA ATCGACGTCA AGACGCCGGC GGGCAAGGTC GACGGCGCTA TCGAGCTGCC GGCCGAGCTG TTCGACGTCC CGGCCAACAT CGCGCTGATG CACCAGGTGG TCACCGCCCA GCGGGCGGCG GCACGCCAGG GTACCCACTC GACGAAGACG CGCGGCGAGG TCAGTGGCGG TGGCCGCAAG CCCTACCGGC AGAAGGGGAC CGGTCGTGCC CGGCAGGGCT CGACGCGGGC GCCGCAGTTC ACCGGCGGTG GCGTGGTACA CGGTCCCAAG CCGCGCGACT ACAGCCAGCG CACACCCAAG AAGATGATCG CCGCGGCGCT GCGCGGGGCG CTGTCCGACC GGGCCCGCAA CGGGCGTATC CACGCGATCA CCGAGCTAGT GGAAGGTCAA AACCCGTCGA CCAAGAGCGC CAGGGCATTT CTGGCCAGCC TGACAGAACG TAAACAGGTG CTGGTGGTCA TCGGGCGCAG CGACGAGGCC GGCGCGAAAA GCGTGCGCAA TCTGCCGGGC GTGCACATCC TGGCGCCGGA CCAGCTCAAC ACCTATGACG TGCTGCGTGC CGACGACGTG GTGTTCAGCG TTGAGGCGCT GAATGCCTAT ATCGCGGCCA ACACCACGAC GTCCGAGGAG GTTTCGGCCT GA
|
Protein sequence | MAAQEQKTLK IDVKTPAGKV DGAIELPAEL FDVPANIALM HQVVTAQRAA ARQGTHSTKT RGEVSGGGRK PYRQKGTGRA RQGSTRAPQF TGGGVVHGPK PRDYSQRTPK KMIAAALRGA LSDRARNGRI HAITELVEGQ NPSTKSARAF LASLTERKQV LVVIGRSDEA GAKSVRNLPG VHILAPDQLN TYDVLRADDV VFSVEALNAY IAANTTTSEE VSA
|
| |