| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_10588 |
|---|
| Symbol | |
|---|
| ID | 5221253 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium tuberculosis F11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009565 |
|---|
| Strand | - |
|---|
| Start bp | 675224 |
|---|
| End bp | 679144 |
|---|
| Gene Length | 3921 bp |
|---|
| Protein Length | 1306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 640605330 |
|---|
| Product | PE-PGRS family protein |
|---|
| Protein accession | YP_001286533 |
|---|
| Protein GI | 148821780 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 64 |
|---|
| Plasmid unclonability p-value | 0.00297042 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 221 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTTCG TAATCGCGAC GCCGGAGATG CTGACCACGG CGGCAACGGA TTTGGCGAAA
ATTGGTTCGA CGATCACTGC GGCCAACACC GCAGCGGCCG CGGTGGCGAA AGTGCTGCCC
GCGTCAGCCG ACGAGGTGTC GGTGGCCGTT GCGGCGTTGT TCGGCACGCA CGCCCAGGAA
TATCAGACCG TCAGCGCCCA AGTGGCGACG TTTCATGACC GGTTCGTGCA GACCCTGTCC
GCGGCCGCGA GCTCGTACGT GGCCGCCGAG GCGGTCAACG TTGAACAGAG TTTGCTAGCC
GCGGTCAATG CGCCCACCCA GGCGCTGTTC GGACGCCCGC TGATCGGCAA CGGCGCCGAC
GGCTCCCCCG GGACCGGGCA GGCCGGCGGG CCAGGCGGCA TCTTGTACGG CAACGGCGGC
AACGGCGGGT CTGGGGCGCC AGGACAACGA GGCGGGGCCG GCGGGGCGGC GGGCCTAATC
GGTAACGGCG GCAACGGTGG AGCCGGCGGC GTGGGTACCA CCGGCGGGGC CGGTGGTCAC
GGCGGCGCGG GCGGGTGGCT GTATGGCAAC GGAGGCGCCG GGGGTTTTGG CGGGGCCGGG
GCGGTCGGCG GCAACGGCGG GGCCGGCGGT ACCGCCGGGT TGTTCGGTGT CGGCGGGGCC
GGTGGGGCCG GAGGCAACGG CATCGCCGGT GTCACGGGTA CGTCGGCCAG CACACCGGGT
GGATCCGGCA CCGCTGGCGG GGCCGGCGGG ATCGGCGGCA ACGGCGGGGC CGGCGGGGCC
GGCGGGGTGC TGATGGGCAA CGGCGGCAAC GGCGGGGCCG GCGGCGAGGG CGGGCCCGGC
GGCGCCGGCG GTGCGGGCGC CAGCGGCGCC CACGCCACCA ACTTGGGCGC TGACGGTCAA
GCCGGCGGAA ACGGCGGGAA TGGTGGGGCT GGCGGGACCG GCGGGGTCGG CGGGCCCGGC
GGCGGCCACG GTCTGCTCGG CCTCGGCGGC AGCCACGGCG CCGGCGGGGC TGGCGGTAGC
GGCGGTGACG GCGGAGCTCC CGGTGACGGC GGCAACGGCG CTACCGGGAC GTGGGGTCAC
AACCTTGGTG CCGGCGGGAC CGGTGGCAAT GGCGGCAACC CGGGCGCCGG TGGGGCCGGT
GGCGCCGGTG GCGCCAGCGT CGGCGGCAGC GCGCATGGCG CGAACGGCGC GCCCGGCACC
ACCTCCACCA GCGGTGGTAA CGGCGGCGAC GGCGGCAAAG GCGCCGACGC TATCAGCAGC
GGACAGACCG GCGCGAACGG TGGCAGGGGT GGCGACGGCG GTCAGGTGGG TAATGGCGGT
GCCGGTGGGG CCGGTGGCCG CGGCGGGGCC GGCGGTCTCG GATTTGGATC CGAAGCGCCC
GGTCGCCCCG GCGGGGCCGG CGGCACCGGC GGGGCCGGCG GCAACGGCGG AACTCAGGCC
GGTGACGGCG GCACCGGAGG TGCTGGCGGG GCCGGCGGCG ATGGCGGATC CGGAGGTGCT
GGCAGCATCG GCTTCAATGC GTCCGCTCCC GGGGCCGCAG GCTCACCCGG CGGGAATGGC
GGTAACGGTG GGCCTGGCGG AGCCGGCGGC GAGGGCGGGG CCGGCGGTCT CGCGTTGGCC
GCCTCGGGCC AGAACGGCAG CCAGGGCGCT GGCGGTGACG GCGGAGCCGG CGGGAACGGC
GGGACTCCTG GCAACGGCGG TCACGGCGCC GCCGGCGCGC TCGGTGTCAA CGGTGGTGTA
GGTGGCGCCG GTGGCCACGG CGGTGATCCC GGTGTCGGCG GTGCCGGCGG CCAGGGCGGA
AGCGGCTCCA CCCCCGGTGC CAACGGCGCA CCCGGCAACA CCCCCACCAG CGGCGGCAAC
GGCGGCAACG GCGGCAGAGG CGCCGATGCC ACCGGCTTTG GCCAGACCGG CGCGTCCGGC
GGCAGGGGCG GTGATGGCGG TTTGGTCGGC AACGGCGGCG CCGGCGGCGC CGGCGGCAAC
GGCAGCAAAG GCCTGCCCGG TCTGGGCAGG CTCGGCAACC CCGGCCTGGA TGGCGGCACC
GGCGGAAACG GTGGGGCCGG TGGATCCGGC GGCGCCTGGG CGGGCAACGG TGGCACCGGC
GGGGCCGGCG GCACCGGCGG CGTCGGCGGG ACTGGAGGGT CCGGCAGCGA CGGTGTCAAC
GGTTCCAGCG CGGGCGCGGA CGGGCACCCC GGCGGCACCG GCGGAGTTGG CGGTACCGGC
GGAAAAGGTG GGGACGGCGG GGACGGCGGG GCCGCACCCA ACGGCGTCGC CGGCAGCCAA
GGCCCCGGCG GTGCCGGCGG CGACGGTGGG ACCGGCGGAG TTGGCGGTAA CGGCGGCCGC
GGCATTGACG GCGCCGACGG CGCCACCGCG GGTGCCCGCG GCCAGGATGG CGGCGCCGGC
GGGGCCGGCG GAAAGGGCGG CCGAGGCGGG ACCGGCGGGC CGGGCGGGGC CGGGCCGGCG
GGCACAACCG GCAGCCAAGG CGCCGGCGGC AACGGCGGCA GCGGCGGCAC CGGCGGGGAC
CCCGGTGACG GCGGCAACGG CGCTAACGGC AGCGTGTTCA CCAACAACGG CATCGGCGGC
AACGGCGGCA ACGGCGGCAA CGCCGGCCCC AGCGGGGCCG GCGGGAGTGG CGGCGCCGGC
TCCACTTTCG GTGCGACCGG CTCAAGCAGC AGCATTCACG TCAACGGCGG CAACGGCGGC
AACGGCGGCA ACGGCGACCA TGCCCTCAGC GGCAACGGCG CGGCCGGCGG CAACGGCGGC
AACGGCGGCA ACGGCAGCCT GCGCGGCAGC GGTGGGGCCG GCGGCCACGG CGGCAACGGC
GGCAATGCCA GCAGGGGCAT GGGCGGTGAC GGCGGAACCG GTGGCGCCGG CGGAAACGCC
GGGCAGATTG GCAACGGCGG AGCGGGCGGC AATGGCGGAG ACGGCGGCAC CGGTAGTGAC
GGCAATCCCG GAGCCATTAC CGGCAGCGGC GGCCGCGGCG GCGACGGCGG CGTAGGCGGG
CAAGGTGGGA GCGTCGCCGG CGACGGCGCT GACGGCGGCC GGGGCGGGGC CGGCGGCACG
GGCGGGACGG GCCTGCGGGG CACCACCGGC GCCACCGGTG CGACCGGCAC ATTCGACGCT
GGCGCGGACG GTCACGGCGG TAACGGTGGC ACCGGCGGGG TTGGCGGGAC CGGCGGCGCC
GGCGGCGGCG GCGGCAACGG CGGGGCCGGC GGCAAAGCGC TGTCGCCAAC GGGCAACAAC
GGCAGCCAAG GCGCCGGCGG AGATGGTGGG GCCGGTGGCG CCGGCGGCAC CGGCGGCACC
GGCGGCGACG GCGGCAGAGG TGCCCACGGC ACTCTCTTCA GCAGCCTCGC TGGCACTGGC
GGGACTGGCG GAAATGGCGG CACCGGCGGC ACCGGCGGCA CCGGTGGTGC CGGCGGTGCC
GGCGGCACCG GTTCCACCCT GGGCGCGACC GGTGCGACAG GGGCGGCCGG CCGCGCCGGA
AACGGTGGCG TCGGCGGCAG TGGCGGCCTT GGCTCCGCCT TTGGCCCCGG CGGCACCGGC
GGCATGGGCG GCGCCGGCGG CACCAGCACC GTCAGCGCCG GCGGTGACGG CGGAAGGGGC
GGCTTCGGCG GCGACGGCCT TGATGCCAGT TCCGGTGGGA ATGGCGGGGA CGGCGGGCAC
GGTGGCGACG GCTTCAGGAC CGCTGGGGCG GGCGGGCGAG GTGGGGACGG CGGCAAAGGG
GCCGACCCCG GCGGTTTATT CCCGATCCCT GGGGCTGGCG GTAAGGGTGG CACCGGTGGC
ACCGGCGGCA CCGCACACCT CGGGCCCCTG GCCATCATCG GCCAATCCGG CCAGCCCGGC
CAGTTCGGCA GCCCCGGCGC CGACGGCCGC GGCGGGGCCG GGGGCGCAGG CGGGGGCGGC
GGCGCCGGCG GCAGCTTCTA G
|
|---|
| Protein sequence | MSFVIATPEM LTTAATDLAK IGSTITAANT AAAAVAKVLP ASADEVSVAV AALFGTHAQE
YQTVSAQVAT FHDRFVQTLS AAASSYVAAE AVNVEQSLLA AVNAPTQALF GRPLIGNGAD
GSPGTGQAGG PGGILYGNGG NGGSGAPGQR GGAGGAAGLI GNGGNGGAGG VGTTGGAGGH
GGAGGWLYGN GGAGGFGGAG AVGGNGGAGG TAGLFGVGGA GGAGGNGIAG VTGTSASTPG
GSGTAGGAGG IGGNGGAGGA GGVLMGNGGN GGAGGEGGPG GAGGAGASGA HATNLGADGQ
AGGNGGNGGA GGTGGVGGPG GGHGLLGLGG SHGAGGAGGS GGDGGAPGDG GNGATGTWGH
NLGAGGTGGN GGNPGAGGAG GAGGASVGGS AHGANGAPGT TSTSGGNGGD GGKGADAISS
GQTGANGGRG GDGGQVGNGG AGGAGGRGGA GGLGFGSEAP GRPGGAGGTG GAGGNGGTQA
GDGGTGGAGG AGGDGGSGGA GSIGFNASAP GAAGSPGGNG GNGGPGGAGG EGGAGGLALA
ASGQNGSQGA GGDGGAGGNG GTPGNGGHGA AGALGVNGGV GGAGGHGGDP GVGGAGGQGG
SGSTPGANGA PGNTPTSGGN GGNGGRGADA TGFGQTGASG GRGGDGGLVG NGGAGGAGGN
GSKGLPGLGR LGNPGLDGGT GGNGGAGGSG GAWAGNGGTG GAGGTGGVGG TGGSGSDGVN
GSSAGADGHP GGTGGVGGTG GKGGDGGDGG AAPNGVAGSQ GPGGAGGDGG TGGVGGNGGR
GIDGADGATA GARGQDGGAG GAGGKGGRGG TGGPGGAGPA GTTGSQGAGG NGGSGGTGGD
PGDGGNGANG SVFTNNGIGG NGGNGGNAGP SGAGGSGGAG STFGATGSSS SIHVNGGNGG
NGGNGDHALS GNGAAGGNGG NGGNGSLRGS GGAGGHGGNG GNASRGMGGD GGTGGAGGNA
GQIGNGGAGG NGGDGGTGSD GNPGAITGSG GRGGDGGVGG QGGSVAGDGA DGGRGGAGGT
GGTGLRGTTG ATGATGTFDA GADGHGGNGG TGGVGGTGGA GGGGGNGGAG GKALSPTGNN
GSQGAGGDGG AGGAGGTGGT GGDGGRGAHG TLFSSLAGTG GTGGNGGTGG TGGTGGAGGA
GGTGSTLGAT GATGAAGRAG NGGVGGSGGL GSAFGPGGTG GMGGAGGTST VSAGGDGGRG
GFGGDGLDAS SGGNGGDGGH GGDGFRTAGA GGRGGDGGKG ADPGGLFPIP GAGGKGGTGG
TGGTAHLGPL AIIGQSGQPG QFGSPGADGR GGAGGAGGGG GAGGSF
|
|---|
| |