Gene Synpcc7942_B2642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_B2642 
Symbol 
ID3772762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007595 
Strand
Start bp36501 
End bp37493 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content58% 
IMG OID637798395 
Productputative zinc-binding oxidoreductase 
Protein accessionYP_398743 
Protein GI81230361 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value0.71048 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACCC CGGCCCTGAT GCAGGCCATG ACCTCGGATC GTTATGGGCC CCCTGAGGTT 
TTGCAGGCAA GGCAAGTAGC GCGTCCCCCT CTAACTGACA ATGGGGTGCT CGTGCGGGTC
CGGGCATCCT CGGTCAACGC GGGTGACTGG CATCTCCTGC GGGGAGAACC GTGGCTGGTG
CGATTGATCT ATGGGGGGTT GTTGACCCCA AAAATCCCCA TCTTGGGGAC GGATCTGGCA
GGTCAGGTGG AAGCGGTTGG GCAGCAAGTG ACCCTATTTC AGCCTGGGGA TGATGTCGTT
GGCGAACTGT CTGCCTGTGG CTTTGGAGCC TTTGCGGAAT ATGTTTGTGT GCCGGAGTCG
GCCTTGGTAG CAAAACCAGT CCACATCTCC TACGAGCAGG CTGCCGCTGT GCCTGCTGCT
GGGATGGCTG CTTTGCAGGG TCTAAGGGAT TTGGGACAGC TCCAACCTGG ACAACGTTTG
CTCGTTGGCG GTGCTTCTGG GGGTGTGGGA TCCCTTGCCG TCCAGATTGG TAAAGCACTG
GGTGCCGAGG TCACGGCCTT GGCTCGTCCG GAAAAAATGG AGATGCTGCG GGGCTTGGGG
GCTGATGATG TGGTGGACGT TAATCGTCTA GAGGTTCTGA TCGATAGTGG GCAGCATTAC
GACGTGATTT TGGATGCCGC CGCTTTTCGG CCAGTGGCGG ACTATCGGCC ACTACTCTCT
CCAGGTGGTG CCTACATTCT GGTGGGGGGC TCTATCGCTC GCTTATTCCA AGTGATGCTC
TTCGGCCAGT GGATGTCATG GCGTCAGCAA CGGCGGATCC GTTGTCTATC GTCCACACCC
ACCCAAGCGG ATCTCACAAC CCTGTGCGAC TGGCTGGAAG CAGGCATCCT GACCCCTTTT
ATTGACCGGA CATTTCCTCT TAGCCAGCTG TCTGAGGCCA TTCGCTATGT GGAGCGACGA
CAGGTGCGGG GCAAAGTAGT CGTTCTGATA TAG
 
Protein sequence
MTTPALMQAM TSDRYGPPEV LQARQVARPP LTDNGVLVRV RASSVNAGDW HLLRGEPWLV 
RLIYGGLLTP KIPILGTDLA GQVEAVGQQV TLFQPGDDVV GELSACGFGA FAEYVCVPES
ALVAKPVHIS YEQAAAVPAA GMAALQGLRD LGQLQPGQRL LVGGASGGVG SLAVQIGKAL
GAEVTALARP EKMEMLRGLG ADDVVDVNRL EVLIDSGQHY DVILDAAAFR PVADYRPLLS
PGGAYILVGG SIARLFQVML FGQWMSWRQQ RRIRCLSSTP TQADLTTLCD WLEAGILTPF
IDRTFPLSQL SEAIRYVERR QVRGKVVVLI