Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_B2629 |
Symbol | |
ID | 3772749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007595 |
Strand | + |
Start bp | 19583 |
End bp | 20806 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637798378 |
Product | sulfonate ABC transporter, periplasmic sulfonate-binding protein, putative |
Protein accession | YP_398726 |
Protein GI | 81230348 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 0.272886 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCATC CTCCTTTCTG CCAGTGCTGC GGCCTGTCTC GTCGCCAATT CCTCAAGCTC TCAGGCTTAT TCACCGGATC TTTAGCGCTC GCTGCGGGTT GCCGTCCCAG CGATAACACC GCAACCGCGC CTAGTAGCCC TGCTAATAAT CAACCGCTCA AAATTGGCTA CCTGCCGATT ACCGATGCCG CACCATTGTT GATTGGTCAT TCTCAAAAGT TCTTTGAACA GGAAGGCTTG CAGGTTGAGG CTCCAACCCT ATTCCGGTCT TGGCCCCAGA TTATTGAGGC GTTTATTGCC CGGAAGGTGA ACGCCATTCA CCTGTTGATG CCTGCTACCA TTTCGCTGCG CTACGGCCGC AATTTCCCTG CCAAGGTGGT CGCTTGGAAC CATACCAACG GCTCAGCACT GACGGTAGGA CCGAGCGTCA ACAAAGTTGA GGACTTGGCC GGTCGCACGA TCGCGGTGCC CTTTTGGTAT TCCGTTCACA ACGTCGTGCT GCAACAAGTT CTGCAAGACA CCGGCTTGAA AGTGGTACGC CGTCCCCGCG AAGCAGCGAT CGCAGACGAT GAAGTCAACC TTGTGGTGCT GCCACCGCCA GATATGATTT CGGCTCTGGC CAACGACAGC ATTGGCGGCT ACATCGTGGC AGATCCCTTT AATGCCGCTG CTGAAAAACG CAAGGTCGGC AAGATTCTCC GCTTTACCGG CGATGTCTGG AAAGATCACG CCTGCTGTGT GATTTTCATG CACGAAGACG ACCTGAAAGA GCGGCCAGAG TGGGCACAGC GCGTCGTCAA TGGACTCGTG GCTTCCCAAG CTTGGATGCG CGATCGCCGT CCAGAAGTTG CCGAAATTCT CTCTAAAGAT GGAGCCGGCA AATATACGCC CCACCCACTA CCCATCCTGC AGCAAGCCCT GACCGCCTAT AGCCCCGAAG TCTATGGCCC GATTGGTGCA ATTCGCCACG CTGATTGGGG CAGCGATCGC ATTGACTTTC AGCCCTATCC CTTCCCGTCC TACACCGAGA AATTGGTGAC GCTACTCCAG CAAACCCAAG TCGAAGGTGA GCGAACCTTC CTCGATCAAC TCTCGCCTCA GCAGGTCGCC ACTGATTTAG TGGATGACTC TTTTGTGCGC AAAGCGATCG CGGCGAAGGG TGGCCCCGCT CAATTTGGCC TCACTCCTGA CTTCCGTCGT CAAGAAGTCT TCCAGGTCGC CTGA
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Protein sequence | MIHPPFCQCC GLSRRQFLKL SGLFTGSLAL AAGCRPSDNT ATAPSSPANN QPLKIGYLPI TDAAPLLIGH SQKFFEQEGL QVEAPTLFRS WPQIIEAFIA RKVNAIHLLM PATISLRYGR NFPAKVVAWN HTNGSALTVG PSVNKVEDLA GRTIAVPFWY SVHNVVLQQV LQDTGLKVVR RPREAAIADD EVNLVVLPPP DMISALANDS IGGYIVADPF NAAAEKRKVG KILRFTGDVW KDHACCVIFM HEDDLKERPE WAQRVVNGLV ASQAWMRDRR PEVAEILSKD GAGKYTPHPL PILQQALTAY SPEVYGPIGA IRHADWGSDR IDFQPYPFPS YTEKLVTLLQ QTQVEGERTF LDQLSPQQVA TDLVDDSFVR KAIAAKGGPA QFGLTPDFRR QEVFQVA
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