Gene Synpcc7942_B2626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_B2626 
Symbol 
ID3772746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007595 
Strand
Start bp497 
End bp1321 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content56% 
IMG OID637798357 
Producthypothetical protein 
Protein accessionYP_398705 
Protein GI81230345 
COG category[K] Transcription 
COG ID[COG1475] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0898981 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCGAA AGCGCCCGAG CTTACCCAAA CTAGAGCTGA GAAGCGGCAT TGCAGGCAGT 
GTGATCGAAC GTCTAGCCGC CGATGCAGGC GGACAGCGAG AGGCATTGCC CCTCGAACAA
ATTCGGGAAC GTCCAGGTGG TGACGCGCGG AAGCTGCGCT TTGCGCATGT TGAAGCGTTG
GCTGAGTCCA TTTTGCTGGT GGGCTTGATT CAGCCGGTCG TGGTCGATCG CCAAGGGCAT
CTGCTTGCTG GTGGTCATCG TCTGGCAGCT CTCCGGCTAT TGCAGAAACA GCACCCGCGT
CAGTTTGAAC GACTGTTTGC TGGGGGAGTT CCGGTTCGCC GTCTTGAGAT CGATGCCGAT
GCAGAAACTG CGGCCGCCCT AGAGATTGAA ATCACTGAGA ACGAGAAGCG GCTCGACTTC
AGCCGAGGGG AAGTGCAAGC CGTTGCTCAA CGCCTGCTGG ATGCAGGCTA TCAACGCCGC
CGAGGGAAGC CAAGCCAAGG TGAAAAGCCG TTGGTTCCTG CCCTGATGCG GGTTTTTGGC
AAGTCTCGCA GTACGATTCT GCGCTACCTT GAACCGGATT CAGCCGAGCT AAATATGTCA
AATGACACAT TTAGCGATCG CGATCAGCCC GAAGTTCCCA CTGACTCTAT TCCCGTCGCG
CTGGTCTTGA AAGCGCCACG TCACCAAGCT GAAGCGGTAG CGCAGGCTTA TGCTCAAGCG
CTTCAGAACG CAGGGATTCA AGTTGAACAA TGGTCTGTGC AATCTGGCTC TGGAGCCGTG
GCAACGATTC GACTCCAGAC GCAATATCAG ATCGAGCAAT CTTAG
 
Protein sequence
MSRKRPSLPK LELRSGIAGS VIERLAADAG GQREALPLEQ IRERPGGDAR KLRFAHVEAL 
AESILLVGLI QPVVVDRQGH LLAGGHRLAA LRLLQKQHPR QFERLFAGGV PVRRLEIDAD
AETAAALEIE ITENEKRLDF SRGEVQAVAQ RLLDAGYQRR RGKPSQGEKP LVPALMRVFG
KSRSTILRYL EPDSAELNMS NDTFSDRDQP EVPTDSIPVA LVLKAPRHQA EAVAQAYAQA
LQNAGIQVEQ WSVQSGSGAV ATIRLQTQYQ IEQS