Gene Synpcc7942_2604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2604 
Symbol 
ID3775201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2686728 
End bp2687315 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content43% 
IMG OID637801058 
Productcytochrome c oxidase subunit III 
Protein accessionYP_401621 
Protein GI81301413 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.204507 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAGCA CTTTGGAAGC CTTAAAAACT CATCACCTTG AAGAAGCACA TCCTGATCAT 
CGAATCTTTG GGCTCATTCT GTTCCTTGTT GCCGAAGGGA TGATTTTCCT GGGCTTATTT
GCTGCCTATC TCACCTTTCG GGCTGTCAAT TCATTACCCG CAGAGCAAAT GCCTGAGCTG
GAGCTACTCA TTCCAGCGAT TAACACAACC ATCTTAATCA GCAGTAGCTT TGTTATTCAT
GGCGCTGAAG ATGCGATTAA GCAAAATAAC GTCAAAGCGG TTCAGCGCTA CTTTGGCATT
ACTGCTCTGA TGGGTGTTGT TTTTCTAGTT GGTCAAATTT ATGAATATAG CCAGTTAACA
TTTGGCCTCA GAGATAACTT GTTTGCCAGC ACTTTTTACG CCCTAACTGG CTTCCACGGC
CTACACGTCC TCGTAGGACT ACTGGCAATT CTGGCTGTTC TGTGGCGATC GCGGCAACCA
GATTATTATT CAGACCAACA TCATTTCGGC ATTGAAGCTG CTGAAATTTA TTGGCACTTT
GTTGATATCG TCTGGATTGT TTTATTTGTA TTGCTTTACT TGATTTAG
 
Protein sequence
MTSTLEALKT HHLEEAHPDH RIFGLILFLV AEGMIFLGLF AAYLTFRAVN SLPAEQMPEL 
ELLIPAINTT ILISSSFVIH GAEDAIKQNN VKAVQRYFGI TALMGVVFLV GQIYEYSQLT
FGLRDNLFAS TFYALTGFHG LHVLVGLLAI LAVLWRSRQP DYYSDQHHFG IEAAEIYWHF
VDIVWIVLFV LLYLI