| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2602 |
|---|
| Symbol | |
|---|
| ID | 3775199 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | + |
|---|
| Start bp | 2684044 |
|---|
| End bp | 2684991 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637801056 |
|---|
| Product | cytochrome c oxidase subunit II |
|---|
| Protein accession | YP_401619 |
|---|
| Protein GI | 81301411 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 |
|---|
| TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 53 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.405519 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCAATTC CCAGCAATAT TTTGACGCTA CTGGCAGGAG TTGCCATCAC CTGTCTAAGC
CTTTGGTACG GACAAAACCA TGGCTTGCTT CCAGTTGCAG CCGCGACAGA TGCGCCTCTA
GTCGATGGTT TGTTCAATAC CATGATGACG ATTGCAACCG GCCTCTTCTT ACTAGTTCAA
GGCCTCATTT TTGTCATCCT CTGGCGCTTC CGGCGTAAAC CCAACGATGT CACTGACGCC
GCTCCCATCC ATGGCAATCT CGCCCTCGAG ATTCTCTGGA CTGGAATTCC AGTGGTGATT
GTTTTGGGCC TTTCCGTCTA TAGCTTTAGT GTTTACACCA CGATGGGTGG GCTCTCCGTG
GGACACGGCG GCGGACACAT GGCTCACGCA CAGCCTCGGG ACTCTGCAAT CGCCGCTGAA
CTCTCCAGCG ATTCACTCCA GGACTCCAAA AGTACTCCTC GGGTTTCTGC AGGCCTCGGA
GCTCCTACAG AGGCTCTGCC GGATGTCACA GTCAATGTCA AGGGCCTCCA GTTCGCCTGG
ATTTTTAACT ATCCCAGTCA CAACTTGATT GCCGGTGAAC TGCATTTACC TCTTGGCAAA
AGCGTTCAGC TTGAGATTGA AGCGCAAGAC GTCATCCATG CTTTTTGGGT ACCACAGTTT
CGCCTCAAAC AAGATGCCAT TCCTGGTGAG AGAACCCGTC TGCAGTTCAC ACCCACTCAG
CTCGGAACTT ATCCTATTGT TTGCGCAGAA CTCTGTGGTA GCTATCACGG CGCGATGAGA
AGTCAGGTCA TCGTCGAGAC TCCTGAAGAT TACGATCGCT GGATTCAATC ACAAACTACG
ACAGCAGCCG TTGTCCCTAG CCGTCTTGAG ACAGCAACTG CCGCTTTAGA TCTTCAGGTT
GAGCCAGAAC ATCTCCATCA TCTGCATCAG CTAGCCTCCT CTCTTTAG
|
|---|
| Protein sequence | MAIPSNILTL LAGVAITCLS LWYGQNHGLL PVAAATDAPL VDGLFNTMMT IATGLFLLVQ
GLIFVILWRF RRKPNDVTDA APIHGNLALE ILWTGIPVVI VLGLSVYSFS VYTTMGGLSV
GHGGGHMAHA QPRDSAIAAE LSSDSLQDSK STPRVSAGLG APTEALPDVT VNVKGLQFAW
IFNYPSHNLI AGELHLPLGK SVQLEIEAQD VIHAFWVPQF RLKQDAIPGE RTRLQFTPTQ
LGTYPIVCAE LCGSYHGAMR SQVIVETPED YDRWIQSQTT TAAVVPSRLE TATAALDLQV
EPEHLHHLHQ LASSL
|
|---|
| |