| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2571 |
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| Symbol | |
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| ID | 3775164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 2650102 |
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| End bp | 2651979 |
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| Gene Length | 1878 bp |
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| Protein Length | 625 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637801021 |
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| Product | penicillin-binding protein 1A |
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| Protein accession | YP_401588 |
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| Protein GI | 81301380 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.558946 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGCC TGACAACACC ACAATTACCC CGACCGCGAT CGCGGCGAAA ATGGCCGCTG
CGCCTTGTCT ATGGCAGCAG TGCGATCGCG ATCGGGGCTG TACTGGGACT AGCCCTCAGC
TTTCGGAACT TGCCTGACGT ACGGCTGCTG CGGCGCTACG TGCCCAGCCA GACCACCTAC
ATCTACGACA TCAACGGTGA GTTGATCGCT GCGCTCCACG ACGAAGCCAA TCGGGAGACA
GTCCCACTCA ACCAAATTTC GCCGAAGTTG CAGCAGTCGG TTCTCGCGAT CGAAGACAGT
AATTTCTATG ACCATCCCGG CATTAACCCG ATCGGCATTG GCCGCGCGAT CGTCGCCAAC
TTTAGTTCTG GGGGCGTGGT CGAGGGCGGT TCAACCTTAA CCATGCAGTT GGTCAAAAAC
CTGTTTCTAA CGCCCGATCG CAACTTTGGC CGCAAGCTCA GTGAAGCGGT ATTAGCGCTG
CGCCTCGAGC AAGTCATCAG CAAAGACCGG ATCCTGGAAC TCTATCTCAA CCAGGTTTAC
TGGGGGCGCA ACCTTTACGG GGTGGAGATG GCATCCCGCA GCTATTTCAA TAAGTCTGCC
GCCAACTTGG ATTGGGCAGA GGCGAGCTTC TTAGCCGGTT TGATTGCGGC TCCAGAGTTC
TACACCCCCT TTGATGAGCG CGATCGCCTC AGTCCCCAGC GACTCGAACG GGCCAAAGAG
CGACAACGGC TGGTGTTGCA GCGACTGGTT GAGATCGGCC AGCTCAGCCC CAGTGCCGCT
AGTGCTGCAG CTGCTGAACC CCTGAAATTT GGTGAAATCA GCTCTTTTCG ACCGAGCAGC
GCTCCCTACG TCAGCGATGC AGTGATTCAG GAACTCGCCC AACAGTTTGG CCGCAGTGCA
GTGGTTCAAG GAGGCCTGCG TGTCCAAACC ACGATCGACC TGCGGATGCA GCGACTGGCC
GAAAAGGTCA TTCAGGAAAA CTATCAGCGC AATCGCCGTG CAGGCTTACG GGCTGACGAA
ATGGCTCTTG TCGCGATCGA TCCACGTACC CACTTCATCA AAGCCATGGT GGGTGGCGTG
GACTACCGCA CCAGTCAGTA CAACCGTGTG ACCCAAGCGC GTCGTCAGCC CGGTTCTGCC
TTTAAGCCTT TTGTCTTCTA CGCAGCCCTC GCCACAGGCA AATATAGGCC CAATAGCTCG
ATCGCAGATA CCCCTGTCAC CTATCAGCTA GGGGCAGAAA CCTATTCCCC TCAGAACTAC
GATCGCAGTT TTGCCGGCAA CATGAGTCTG ACCAGTGCTC TGGCGCAGTC CCGCAATATT
CCCGCTGTGC GCCTCGGTCA AACAGTCGGC CTTGATCGCG TCATCGAAAT TTGTCGCCGT
ATTGGCATTA GTAGCCCGAT GCAGCCAGTC GTCTCTCTGC CCCTCGGGGC GATCGGGGTC
ACGCCGCTAG AACTGACGAA CGCTTATGCA ACGCTGGCTA GCGGGGGTTG GTACGCGCCA
CCGACCCTCA TCCTGCAAGT GCGCGATAGC CAAGGTCGAC GCTTACTGGA CCATACGCCT
CGGCCTCAGC CAGAACTGCA GTCGAAGGCA GTGGCCCAGC TCAATCAGAT GATGCAGGCC
GTGGTCACTA GCGGTACGGG CAGAGCGGCT CAGTTCAATC GCCCCGTGGC TGGCAAAACT
GGCACAACAT CTGATGAACG GGATATCTGG TTTGTGGGCT ACACCCCAGA TCTTGCGGCT
TCTGTTTGGT TGGGCAACGA TGACAACAGC AAAATTGGGG GCGGGGCAAC CGGCGGCGCG
ATCGCCGCAC CGATTTGGCG AGAATTTATG CAACAAGCCC TCGCCCAACA GCCAGTTGAG
TCGTTTCCAA AGCCCTAA
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| Protein sequence | MSSLTTPQLP RPRSRRKWPL RLVYGSSAIA IGAVLGLALS FRNLPDVRLL RRYVPSQTTY
IYDINGELIA ALHDEANRET VPLNQISPKL QQSVLAIEDS NFYDHPGINP IGIGRAIVAN
FSSGGVVEGG STLTMQLVKN LFLTPDRNFG RKLSEAVLAL RLEQVISKDR ILELYLNQVY
WGRNLYGVEM ASRSYFNKSA ANLDWAEASF LAGLIAAPEF YTPFDERDRL SPQRLERAKE
RQRLVLQRLV EIGQLSPSAA SAAAAEPLKF GEISSFRPSS APYVSDAVIQ ELAQQFGRSA
VVQGGLRVQT TIDLRMQRLA EKVIQENYQR NRRAGLRADE MALVAIDPRT HFIKAMVGGV
DYRTSQYNRV TQARRQPGSA FKPFVFYAAL ATGKYRPNSS IADTPVTYQL GAETYSPQNY
DRSFAGNMSL TSALAQSRNI PAVRLGQTVG LDRVIEICRR IGISSPMQPV VSLPLGAIGV
TPLELTNAYA TLASGGWYAP PTLILQVRDS QGRRLLDHTP RPQPELQSKA VAQLNQMMQA
VVTSGTGRAA QFNRPVAGKT GTTSDERDIW FVGYTPDLAA SVWLGNDDNS KIGGGATGGA
IAAPIWREFM QQALAQQPVE SFPKP
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