Gene Synpcc7942_2540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2540 
Symbol 
ID3775133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2621837 
End bp2622298 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content58% 
IMG OID637800990 
Productblue-copper-protein-like protein 
Protein accessionYP_401557 
Protein GI81301349 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4454] Uncharacterized copper-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00275414 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCATC TCTCATCTCT ATGGAAACCG CAAGGGCTGC GCCACTGGCT GCTATGGTTG 
GCGATCGTGC TCTGGGCTGC TTGGTGCTGC TGGCCGAGAC CAGTGATCGC GGCCACCGTT
CGGCAAAGCA TTAGCATCGA TCTCGGGAAT GCAGCAGGCG AGCTGCGCTT TTTCCCCAGT
CAACTCCGGC TCAAAGCGGG CCAGCCCTAC GAATTGGCCT TACATAATCC CAGCCCACTC
AAGCACTACT TCACCGCCAA AGACTTTAGC GATGCTATCT GGACTCGCAA AGTCGATGCC
GGTGGTGTCG AAGTCAAGGG CAGCATTCGG GAGCTGGAGC TGCGGCCTGG CAGTGAAGCC
GTGTGGCAAT TTACCCCGGA ACGGCCCGGA CAATATGACC TACGCTGTCG CATTGCGGGG
CATACCGATG CGGGCATGAC AGGACAGTTA ATCGTCGAGT AA
 
Protein sequence
MAHLSSLWKP QGLRHWLLWL AIVLWAAWCC WPRPVIAATV RQSISIDLGN AAGELRFFPS 
QLRLKAGQPY ELALHNPSPL KHYFTAKDFS DAIWTRKVDA GGVEVKGSIR ELELRPGSEA
VWQFTPERPG QYDLRCRIAG HTDAGMTGQL IVE