| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2519 |
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| Symbol | |
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| ID | 3774539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 2599191 |
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| End bp | 2601896 |
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| Gene Length | 2706 bp |
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| Protein Length | 901 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637800968 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_401536 |
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| Protein GI | 81301328 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGTCAT TTTTTTCCTG GATACCTCTT CCCAGACTGA GGGACTGGCC TGCCATTACC
CTGGCAGCTG GAGTTCATAT CCTGATCTCT CAGTTTGCCT ATTCCTATAT CAGTTTTACT
GATGCAAAAG TCACCCCTAT TTGGCCCTCA GCGGGAGTAC TGCTAGCAGC TCTTTTTTTG
GCGGGCCCAC AGGTGTGGCC TGGCATCTTC ATCGGCGATT TTTTACTGAA GCTGATGACA
GGTTTGGGCG TTGGAGTGAG CCTGAGTGGC GCAGTTGCTA ATGCCAGTTC TCGCTTGGTC
GCCTATGCGA TCGCAAAACG AGCCATTAGT CGTTCAAGTC GCTTGCAAAC ACTTGATGAA
GTTTGGACAC TTTTAGCGGC AGCAGTAGCT CAAGCAACGG TATCTGCCCT AATAGGAGCA
ACTGGGAATT GCCTATTTGG CGCGGCTAGT TGGAATCGCT TCTTCACAAT TGGCTGGACT
TGGTGGACCG GCAATGCCAG CAGTGCGATT TTATTTTTTC CGGTTGTCTT GCTATGGTGC
AATCAATGGC GTCAGTCGCT GCAACTTTCT GCTAAGCGTT GGCTAGAGCT CTTCATTATT
AGTGCAATCA TTCTTGCGAT CGCAACCTTA GCATTTGCGA GTAAACCCTA TCCAGTATCT
TCACTAGTTA TTCCAGTCTT CGTCTGGCTG GCGCTACGTT TTAACAGCAC TTGGGTATCA
ACAGGGATTA CTTTTATTAC CCTGTTTGCT TTTATTTCGA CTGCTAATGG CAAAGGGCAA
TTTAGTGTCT TGGCGGTGAA TGAAGCACTG ATCCTTTTGC AAAGCTACAA CAGCAGTATT
GCTGTGATGA GTTTTAGTCT CAATGCAGTG ATTAGCCAAG CTAGAAATAG TCAGACATAC
TTGCGACAAA TTCTTGATCA TCTTCCGATT GGTGTTGCTG TTCATGAGCT GACAGGTCGA
ATGACTTATG TGAATGCAGT TGGTCGAGAG ATTTTAAGAG GCAAGTATAA GAGTGCCACA
CTTGAGGAAA TGGCTAAGTT TTTTAATATT TATCAGGCAA GTAAAAACAG ACTCACCCCG
ATTGAAGAGC TACCCCTGGC GATGGCTCTT CAAGGCCAGT TAAGCCATAC TGAAGATCTT
GAATTACGCT GGCCTGATCG CACTATACCT TTAGAGGTTT GGGGAATTCC TATCCATGAT
GAAACCGGCC ATATCAAAGA AGGAATGACT GTTTTTCAAG ATATTCATGA ACGCCTTGAA
AATGCTCGTC TGATTCAACA AGCAAATGAA CAGCTATCCC TTACAGTTCA AGAATTAGAA
GCTGCTAATC ATAAGTTAGA GCAGGAGGCC TCGGAACGAC AGCAAGCCCA AGCTCAACTC
TGGCATTTGG CTCACTTTGA CACACTGACT CAACTTCCTA ATCGAGCCTA TTTTGTTGAG
CAATTACATG CTTGGTTCAA TCGTTATAAG GCTGATCATC AATATCCGTT TGCTGTTCTC
TTCTTAGACT GCGATCGCTT CAAAATTGTC AATGACTCCC TCGGTCATAG TGCGGGTGAT
GTTCTGCTCA CGCAAGTTGC ACAACGCCTG CAAAGCTGTA TTGCTTCGCC AGTGATCTTC
GCGCGCCTCG GTGGCGATGA GTTTGGGGTG TTAGTCCCAG CTCAAGACCC CGGCTATCCT
CAGGATCTCG CGGAGCAACT GCATGAGTTA ATTGTCCATC CGTTTGAAAT TCAAGGACAG
CGTATCTACA TCGGTGTCAG CATCGGCATC AGTTTTGTCT CTGCCCAGAT CGATGCTGCT
GAAGAGTTGC TCCGCAGCGC GGATACAGCA ATGTATGCTG CCAAACGCAA TCCCCTCAGT
CGTGGCATTC AGATCTTCTC GGCTAAACTC TCTGCCAATT CCCTCAAGAA CCTTGCTCTA
GAAACAGCCC TACGGGAGGC AATTAAGCAA GCAGATATTG ATCTTTTCTA CCAGCCCATC
GTCGATCTTG AGACCGGCGC TCTCGTCGGG GCGGAAGCAT TAGCCCGCTG GTTTCATCCT
GAGCTGGGCA ACATTCCCCC CTTGGAATTT GTGACCCTCG CTGAGCGATC GAAACTAATT
TTCAGTCTCG GTAATTTTAT TCTTGAAAAG GCCTGCCTGC AGATTCACCT CTGGCAACAG
GATCACTTGA TTACTCCTGG CGACTTCATC TTGCACGTCA ATATCTCGGC CCAGCAGATT
TGTCACGAAG ACTTTGAGGA CTGGATCAAA GATATTCTGC AAAGAACGGA AATATCCGCT
CAGAATCTCA TGCTAGAAAT TACTGAGTCC AGTGTTGCTG AAGATATTGA CCAGCAGTTG
CTCAAGCTGC TCGATGAGCT GAAATCGATG GGAGTCCAGC TGAGCATCGA TGACTTTGGA
ACAGGGTATT CTTCGCTGAG CTACTTGCAA AGGCTGCCGG TTAATTCCCT CAAAATCGAT
CGCTCCTTCA TCCATCAAAT CAACTTGGCT GGGGATAACC GCCAGGTCGC CCAAGCCACG
ATCGCGCTGG CCCATAGCTT TGGCTTGGAG GTTGTTGCCG AAGGCATTGA AGAAGAGTCT
CAGCTCTACT GGTTGCGGCA GCTAGGCTGC GATATGGGGC AGGGCTATTA CTTCTCGAAG
CCCCTATCAG CTGCTGATAT GACCGAGTTT CTGCGCTGCC ACGGCTCTGC TAGCCAAACC
CGGTAA
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| Protein sequence | MLSFFSWIPL PRLRDWPAIT LAAGVHILIS QFAYSYISFT DAKVTPIWPS AGVLLAALFL
AGPQVWPGIF IGDFLLKLMT GLGVGVSLSG AVANASSRLV AYAIAKRAIS RSSRLQTLDE
VWTLLAAAVA QATVSALIGA TGNCLFGAAS WNRFFTIGWT WWTGNASSAI LFFPVVLLWC
NQWRQSLQLS AKRWLELFII SAIILAIATL AFASKPYPVS SLVIPVFVWL ALRFNSTWVS
TGITFITLFA FISTANGKGQ FSVLAVNEAL ILLQSYNSSI AVMSFSLNAV ISQARNSQTY
LRQILDHLPI GVAVHELTGR MTYVNAVGRE ILRGKYKSAT LEEMAKFFNI YQASKNRLTP
IEELPLAMAL QGQLSHTEDL ELRWPDRTIP LEVWGIPIHD ETGHIKEGMT VFQDIHERLE
NARLIQQANE QLSLTVQELE AANHKLEQEA SERQQAQAQL WHLAHFDTLT QLPNRAYFVE
QLHAWFNRYK ADHQYPFAVL FLDCDRFKIV NDSLGHSAGD VLLTQVAQRL QSCIASPVIF
ARLGGDEFGV LVPAQDPGYP QDLAEQLHEL IVHPFEIQGQ RIYIGVSIGI SFVSAQIDAA
EELLRSADTA MYAAKRNPLS RGIQIFSAKL SANSLKNLAL ETALREAIKQ ADIDLFYQPI
VDLETGALVG AEALARWFHP ELGNIPPLEF VTLAERSKLI FSLGNFILEK ACLQIHLWQQ
DHLITPGDFI LHVNISAQQI CHEDFEDWIK DILQRTEISA QNLMLEITES SVAEDIDQQL
LKLLDELKSM GVQLSIDDFG TGYSSLSYLQ RLPVNSLKID RSFIHQINLA GDNRQVAQAT
IALAHSFGLE VVAEGIEEES QLYWLRQLGC DMGQGYYFSK PLSAADMTEF LRCHGSASQT
R
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