Gene Synpcc7942_2475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2475 
Symbol 
ID3774495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2556692 
End bp2558116 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content57% 
IMG OID637800924 
Productargininosuccinate lyase 
Protein accessionYP_401492 
Protein GI81301284 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0165] Argininosuccinate lyase 
TIGRFAM ID[TIGR00838] argininosuccinate lyase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0000124507 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGGCCTTCC GCACAAAGAT TCTGGTGACC CAAGCTGCTG CCCCACAACC CTGGAGCGAT 
CGCTTCGAGA CAGCGCTCCA TCCAGCGATC GTGGTTTTCA ATGCCAGTAT CGGTTTTGAT
CTGGCGCTGA TCGAATATGA CCTCACGGGG TCCCAGGCGC ATGCGCAAAT GCTGGCAGAG
CAAGACATCA TCAGCCGCGA GGAAGGTGAG GCGATCGTCG CTGGGCTTGA GCAGATTCGC
AGTGAATATC GCACCGGTCA ATTCCAGCCA GGATTGGATG CTGAGGATGT CCACTTTGCG
GTGGAACGGC GACTGACAGA ACTCCTCGGC GATGTTGGTA AAAAGCTCCA CACCGCCCGA
TCGCGCAATG ACCAAGTGGG TACAGATACG CGGCTCTATC TGCGCGACCG CGTCGATCAC
ATTCGTCAGC AATTGCGTGA CTATCAGCGT GTTCTACTGA GCCAAGCCGA GCAACACCTT
GAGACATTAA TTCCGGGCTA TACCCACCTG CAACGCGCCC AGCCCTTGAG CTTGGCACAT
CATCTCCATG CCTACTTAGA GATGGCAGAG CGTGATTGGG AACGATTAGG CGACCTGCGC
AAGCGCCTGA ATACCTCTCC TTTGGGCGCA GGGGCCTTGG CGGGGACAAC TTTCCCAATC
GATCGCCAGC GCACGGCGGC ATTACTCGGC TTTGAACGCA TCTACGCCAA CAGCTTGGAT
GCCGTCAGCG ATCGCGATAG TCTCGTGGAA TTTCTGGCAG CCGCCAGCTT GATCATGGTG
CACCTCAGCC GCTTGGCTGA GGAAGTGATC CTCTGGGCTT CGGAGGAGTT TCGCTTTGTT
CGCCTCAGCG ATCGCTGCGC CACTGGCTCC AGTATCATGC CGCAGAAGAA AAATCCTGAT
GTGCCAGAGC TAGTGCGGGG CAAGACGGGA CGGGTGTTTG GGCATCTGCA AGCGCTGCTC
GTCGTTTTGA AAGGCTTACC GTTGGCCTAC AACAAGGACT TGCAGGAAGA CAAAGAAGGC
TTGTTTGACG CAGTGCAAAC CGTGGAAAGC TGCCTCGAAG CCATGACGAT TTTGTTTGCA
GAAGGTCTGA GCTTCCAGCC CGATCGCCTA GCGGCAGCGG TCGAAGCCGA TTTTTCCAAT
GCTACAGATG TCGCAGACTA CTTGGCAGCG CGGGGTGTGC CTTTCCGAGA AGCCTACAAC
CTCGTCGGTC GCGTGGTGCG CACCTGTTTG GAGCAAGGCA AACTCCTGAA GGATTTGAGC
TTGGCTGAAT GGCAGGCTCT ACACCCGCAG TTTGAAGCCG ACATCTACAC AGCGATCGCA
CCGCAACAGG TTGTTGCAGC CCGCAACAGC TTGGGTGGCA CGGGTTTTGA GCAAGTACGA
TCAGCCTTGG CCTCTGTGCG GCAACGCTTG GAAGCCACTT GTTAA
 
Protein sequence
MAFRTKILVT QAAAPQPWSD RFETALHPAI VVFNASIGFD LALIEYDLTG SQAHAQMLAE 
QDIISREEGE AIVAGLEQIR SEYRTGQFQP GLDAEDVHFA VERRLTELLG DVGKKLHTAR
SRNDQVGTDT RLYLRDRVDH IRQQLRDYQR VLLSQAEQHL ETLIPGYTHL QRAQPLSLAH
HLHAYLEMAE RDWERLGDLR KRLNTSPLGA GALAGTTFPI DRQRTAALLG FERIYANSLD
AVSDRDSLVE FLAAASLIMV HLSRLAEEVI LWASEEFRFV RLSDRCATGS SIMPQKKNPD
VPELVRGKTG RVFGHLQALL VVLKGLPLAY NKDLQEDKEG LFDAVQTVES CLEAMTILFA
EGLSFQPDRL AAAVEADFSN ATDVADYLAA RGVPFREAYN LVGRVVRTCL EQGKLLKDLS
LAEWQALHPQ FEADIYTAIA PQQVVAARNS LGGTGFEQVR SALASVRQRL EATC