Gene Synpcc7942_2445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2445 
Symbol 
ID3774464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2521920 
End bp2522933 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content52% 
IMG OID637800893 
Productphosphate binding protein 
Protein accessionYP_401462 
Protein GI81301254 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0226] ABC-type phosphate transport system, periplasmic component 
TIGRFAM ID[TIGR02136] phosphate binding protein 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.00605633 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGACCC TCAAGCCTGC ACTGCGTCGT GCTGCTGTAC TCCTGCCGAT CGCTGCTGTC 
GCTTCGTCCC TTTTCCCTAT CCAAGAGGCA AGCGCTCAGC GTGCACTAGT GACTGCTGAC
GGTTCTAGCA CTGTTTTCCC AATCTCCGAA GCAGTGGCTG AAGAGTTCCA AAAACGCAAT
AAAAACATCA ACGTCACTGT CGGCGTCTCT GGTACTGGTG GTGGCTTTAA GCGTTTCTGC
AACGGTGAAA TTGACATCGC CAACGCTTCT CGCCCCATCA AGAAAGAAGA AGTTGAAGCT
TGCCGTAAAA AGGGCATTCG CTACATCGAG CTGCCCGTCG CTTTTGATGC GTTGACGGTT
GTAGTCAACA AGTCCAATCC AGTCAACAGC ATCACCACTG CTGAGTTGGC GAAGATCTTT
GGCCGCGATG CCGAGAAAAA AACAACCAAC TGGCGTCAAG TCAAATCCAG CTTCCCCAAT
CTGCCTTTGA GAGTCTACGC ACCGGGTACT GACTCGGGCA CTTACGATTA CTTCAACGAG
GCAATCCTCA ATAAGAAAGG AACTCGGGGC GACCTAACTG CCAGTGAGGA TGACAACATT
CTGGTGCAAG GGGTGTCGCG CGATCGCGGT GGTATTGGCT TCTTTGGTTT CTCCTACTAC
GAAGAGAACA AAGGTAAGCT CAAAGCACTT GCTGTTGTTA ACAGCAACGG CAAGGCTGTG
ATGCCTTCTG TCCAAAACGT GCTGAATGGC ACTTACGACC CGCTGGCTCG CCCTGTCTTC
ATCTATGTCA GCGAGCAGGC AGCCAAAAAA GCAAACGTCA GATCGTTTGT GAACTTCTAC
CTGCAGAATG CAGGCAAGTT GTCGCGGGAA GTAGGATTTG TGCCGTTGCC AGCCAAAGCT
TACACCGCTG CCACCCAGCG CTTCAGAAGC AACAAAACTG GCACGGTTTT TGCAGGCAAG
AGCCTTGTCG GTGGTTCGAT CGAAGACCTA CTCAAAGCTG AAGGCATCAA CTGA
 
Protein sequence
MTTLKPALRR AAVLLPIAAV ASSLFPIQEA SAQRALVTAD GSSTVFPISE AVAEEFQKRN 
KNINVTVGVS GTGGGFKRFC NGEIDIANAS RPIKKEEVEA CRKKGIRYIE LPVAFDALTV
VVNKSNPVNS ITTAELAKIF GRDAEKKTTN WRQVKSSFPN LPLRVYAPGT DSGTYDYFNE
AILNKKGTRG DLTASEDDNI LVQGVSRDRG GIGFFGFSYY EENKGKLKAL AVVNSNGKAV
MPSVQNVLNG TYDPLARPVF IYVSEQAAKK ANVRSFVNFY LQNAGKLSRE VGFVPLPAKA
YTAATQRFRS NKTGTVFAGK SLVGGSIEDL LKAEGIN