Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_2436 |
Symbol | |
ID | 3774455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 2508849 |
End bp | 2509445 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637800884 |
Product | peptide methionine sulfoxide reductase |
Protein accession | YP_401453 |
Protein GI | 81301245 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0225] Peptide methionine sulfoxide reductase |
TIGRFAM ID | [TIGR00401] methionine-S-sulfoxide reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.228717 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.295225 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGGC TGTTAGTTTT GGGGCTGCTG ATCGCCAGCT TTTGGTTCCC GAATACCGCT GCATGGGCTG CCACTGCAGA AGCCATTTTT GCCGGTGGTT GCTTCTGGTG TGTCGAGGCT GATTTCGACA AAGTTACTGG TGTCACTGAA ACGATTTCGG GCTACAGCGG CGGCACTGTA AAAAAACCGA CTTATAAACA GGTTTCTGCA GGTAAAACGG GGCATTACGA GTCGGTCAAA ATCATCTACG ATCCCGATCA AGTCAGCTAT GACCAGCTTG TCAGTTACTT CCTGCAACAC ATCGATCCGC TCGATGGTGG CGGTCAATTC TGCGATCGCG GCGATCAATA TCGATCGGCA ATTTTCGTGA CACCAGAGCA ACAGCCGATT GCGGAAGCTG CGATCGCAGC CGCAGCTCAA GAACTTGGCC AACCGATTCA AACGAAAATC CAACCAGCGA AAGAATTCTG GGAAGCTGAG AACTATCACC AGAACTACTA TCAAAAACAA GCTCTGCTCT ATAAATACTA TCGAGCCCGC TGCGGTCGCG ATGCCCAAAT CGCCAAGGTT TGGGGCGAGT ATGAGCAACA ATCCTAA
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Protein sequence | MKRLLVLGLL IASFWFPNTA AWAATAEAIF AGGCFWCVEA DFDKVTGVTE TISGYSGGTV KKPTYKQVSA GKTGHYESVK IIYDPDQVSY DQLVSYFLQH IDPLDGGGQF CDRGDQYRSA IFVTPEQQPI AEAAIAAAAQ ELGQPIQTKI QPAKEFWEAE NYHQNYYQKQ ALLYKYYRAR CGRDAQIAKV WGEYEQQS
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