| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2425 |
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| Symbol | |
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| ID | 3774709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 2497699 |
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| End bp | 2498661 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637800873 |
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| Product | chaperon-like protein for quinone binding in photosystem II |
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| Protein accession | YP_401442 |
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| Protein GI | 81301234 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.126236 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGTCC TCGTTGTTGG TGCTACGGGT ACTCTCGGTC GGCAGATTGC CCGCCGAGCC
CTCGACGAAG GCCACCGGGT TCGTTGCCTC GTCCGCAGCC CTAAGCGCGG CAACTTTCTG
CGGGAATGGG GCTGTGATCT GGTGCGGGGC GATCTGACCC AGCCAGAAAG TCTTACTTTT
GCCCTAGAGG GGATAGAGGC CGTCATCGAT GCGGCCACCA CGCGATCTAC AGATTCCCTC
AGCTGCTATG ACGTCGATTG GCAGGGCAAA GTCAACCTGA TCAAGGCGGC TACAGAAGCC
GGTGTGCAGC GGTTTGTCTT CTGCTCGATC ATTGACGCTG AGAAGCACCG CGATGTGCCG
CTAATGGACA TCAAGTACTG CACTGAGGAA TTCCTGAGGC AGTCGGGGCT TAATTACACA
ATCCTGCGGC TGGCGGGCTT TATGCAGGGT TTGATTGCCG AGTTTGCGAT CCCCGTGCTG
GAAGGTCGCA CCGCCTTTAT CACCCAAGAT TCCGACCCGA TCGCCTACCT CAGTACTCTT
GATATCGCCC GCTTTGCCGT TGCTGCATTG ACCACGCCCG CCACTGAGAA GCAAACCCTG
CCGGTTGTGG GTCCTAAAGC TTGGAGCGGA CTTGAAATTT TCCGACTCTG CGAACGGCTG
AGCGGCAAGG AAACGAAGAT TGCCCGTCTG CCCTTGGCAA CGGTGAGTGC AATGAAGCGC
TTCTTCCGCT TCTTCCAGTG GGGCTGGAAT ATCGCCGATC GCTTGGCCTT TAGTGAAGTG
ATGGCTTGCG GCCGCCCCTT CACGGCAGAC ATGGCAGCCA CATACACCGC TTTCGGCATT
GATCCTGCTG AGATCACAGG CTTGGAGAGC TACCTGAACG ACTACTTCTC GGTGATGCTG
CGCCGCTTGA AAGAGCTGGA GTTCGACCAG AAAAAAGACA AGAAAAAGAA AGTGCCGTTC
TAA
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| Protein sequence | MDVLVVGATG TLGRQIARRA LDEGHRVRCL VRSPKRGNFL REWGCDLVRG DLTQPESLTF
ALEGIEAVID AATTRSTDSL SCYDVDWQGK VNLIKAATEA GVQRFVFCSI IDAEKHRDVP
LMDIKYCTEE FLRQSGLNYT ILRLAGFMQG LIAEFAIPVL EGRTAFITQD SDPIAYLSTL
DIARFAVAAL TTPATEKQTL PVVGPKAWSG LEIFRLCERL SGKETKIARL PLATVSAMKR
FFRFFQWGWN IADRLAFSEV MACGRPFTAD MAATYTAFGI DPAEITGLES YLNDYFSVML
RRLKELEFDQ KKDKKKKVPF
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