Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_2417 |
Symbol | |
ID | 3774701 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 2489314 |
End bp | 2490579 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637800865 |
Product | transcriptional regulator, ABC transporter |
Protein accession | YP_401434 |
Protein GI | 81301226 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0335393 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCGCT CTTGGCGTCG CTGCTGCCTT GCATTGGTCT TGGTTGGGAT GCTGTTCGGC TGTGCTCGCC AGAGCCAGAG CGATGGGGAA ATTGTTTTCT GGACGATGCA GCTGCAGCCC AAGTTCATTC CCTACTTCAC AGCACTCATC GATCGCTTTG AGCAAGAGAA TCCCGGCACC AAAGTGCGCT GGGTTGATAT TCCTTGGTCA GCGATGGAGA GCAAAATTCT GACGGCAGTC TCGGCGGGCA CGGCGCCAGA TGTGGTCAAC CTCAATCCAG TTTTTGCCTC GCAGTTAGCG TCGCGGGGCG CTCTCCTCGA TCTCAGTCGG GCAGTGACAC CAGAGCAGCG CGATCGCTAT CTGCCCAACA TCTGGCAGGC CAGTAGTTTG CAGGGTCAGG CGTTTGGGCT GCCGTGGTAC CTGACGACGC GGATTACGAT CTTCAACCGT AATTTGATGC AGCAGGCCGG CCTACAGAAG CCACCAGCGA CCTATGCGGA ACTAGCGAGC GCTGCGAAAC AAATCCGCGA TCGCACCGGC AAGTATGCTT TTTTCGTCAC CTTTGTGCCC GAGGATTCCG GCGAAGTGCT GGAGTCGATG GTGCAGATGG GCGTGAAGTT GGTCGATGAC CAAGGCAAAG CGGCTTTCAA TACTCCTGAA GGGATCGCGG CCTTCCGCTA TTGGGTCGAT CTCTACCAAC AGGGCTTGCT ACCCCAGGAA AGCCTGACCC AAGGCCACCG CCGTGCCGTC GAACTCTACC AATCCGGTGA GATTGCGCTG CTGCAAACGG GCCCCGAGTT TTTGAATGCG ATCGCCACCA ATGCCCCCGC GATCGCAGCC GTTTCAGCTC CTGCTCCCCA ACTGACTGGT GAGACGGGCA AGCGCAACGT CGCCGTGATG AATGTTGTGG TGCCGCAAGA TGCCAGCGAT CGCGAGATTG GCCTCAAGTT CGCGCTCTAC GTCACTGACA GCGCCAATCA ATTGGCTTTT GCGAAAGAAG CGAACGTCCT CCCTTCGACC ACCGCTTCGC TACGGGACTA CCGCCAACAA CTGCGCGATC GCGCCGATAT CAGTTCCACC TTGGCCCAGG CCCGCTCGAT CAGCGCCGCC CAAATGGATC AAGCTCAGGT TCTAGTTCCT GCCGCCGCCG AGATGAAAGA GCTGCAACGG CTGATTTATG AGAATCTCCA AGCTGCGATG CTACAGCGCA AAACTGTGGA ACAAGCCGTC GCCGATGCTG CTGCTGCCTG GAATCAAAGC CGCTAG
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Protein sequence | MIRSWRRCCL ALVLVGMLFG CARQSQSDGE IVFWTMQLQP KFIPYFTALI DRFEQENPGT KVRWVDIPWS AMESKILTAV SAGTAPDVVN LNPVFASQLA SRGALLDLSR AVTPEQRDRY LPNIWQASSL QGQAFGLPWY LTTRITIFNR NLMQQAGLQK PPATYAELAS AAKQIRDRTG KYAFFVTFVP EDSGEVLESM VQMGVKLVDD QGKAAFNTPE GIAAFRYWVD LYQQGLLPQE SLTQGHRRAV ELYQSGEIAL LQTGPEFLNA IATNAPAIAA VSAPAPQLTG ETGKRNVAVM NVVVPQDASD REIGLKFALY VTDSANQLAF AKEANVLPST TASLRDYRQQ LRDRADISST LAQARSISAA QMDQAQVLVP AAAEMKELQR LIYENLQAAM LQRKTVEQAV ADAAAAWNQS R
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