Gene Synpcc7942_2393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2393 
SymbolgltX 
ID3774677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2467688 
End bp2469133 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content60% 
IMG OID637800841 
Productglutamyl-tRNA synthetase 
Protein accessionYP_401410 
Protein GI81301202 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0008] Glutamyl- and glutaminyl-tRNA synthetases 
TIGRFAM ID[TIGR00464] glutamyl-tRNA synthetase, bacterial family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0156972 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00526056 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTCAGTTC GCGTTCGCAT TGCTCCTAGC CCCACCGGCA ACCTCCACAT TGGCACGGCC 
CGCACTGCCG TCTTCAACTG GTTGTTTGCG CGGCGGCATC AGGGCCAGTT CATCCTGCGC
ATCGAAGATA CAGACCTCGA GCGATCGCGA TCGGAATACA CCGACAACAT CCTGACCGGC
CTCCAGTGGC TGGGCTTGAA CTGGGACGAA GGCCCGTTCT ACCAAACCCA GCGGCTCGAC
CTCTACAAAG CCGCCGTGCA GCAATTGCTC GACAGTGGCA AAGCCTATCG CTGCTACTGC
ACCGAAGCCG AACTGGAAGC CCTGCGCGAG TCGCAACGCG CCCGCAATGA AGCCCCGCGC
TACGACAACC GCCACCGCGA CCTGACGCCG GAGCAAGAAG CCGCATTTCA AGCCGAAGGC
CGCGAGGCGG TGATTCGCTT CCGCATTGAT GACGATCGCG AAATCGCTTG GACAGACTTA
GTGCGCGATC GCGTCGTCTG GAAAGGCAGT GACCTCGGGG GCGACATGGT GATTGCCCGC
CGCAGTCCCG CTGGCACGAT CGGTCAGCCG CTCTACAACC TCGCGGTCGT GGTCGATGAC
ATCGACATGA CGATCAGCCA CGTCATTCGC GGCGAAGACC ACATCGCTAA CACCGCCAAG
CAAATCCTGC TCTACGAAGC GCTGGGTGCT GCGGTGCCCG AGTTTGCGCA CACGCCACTG
ATCCTCAACA AGGAAGGCCG CAAACTCTCG AAGCGTGATG GCGTCACCTC CATCTCCGAC
TTCCAAAACT TGGGCTATCT GCCCGAGGCG ATCGCCAACT ACATGACCCT GTTGGGCTGG
TCGCCCGTGG AAGGCATGGA TGAGCGCTTT AGTCTGGCGG AGGCAGCGAC CGTCTTTGAC
TTCGATCGCG TCAACAAAGC CGGTGCCAAA TTCGACTGGG ACAAACTCAA CTGGCTCAAC
AGTCAGGTGA TCAAGGAGAA ATCCGCGAGT GAGTTGGTGG CACTGCTGCA ACCGTTCTGG
AGCAAGGCCG GGGTCGATAC AGCAGCCTAT CCTGCGGCTT GGCTGGAAGA ATTGGCGACT
CTCTTGGGTC CCAGCCTCGT GACCTTGACG GATATCGTCG GCCAAAGCCA GCTCTTCTTC
AGTCAGGGGA TCGAACTGCA AGAAGATGCG ATCGCCCAAC TGGGTCAAGC AGGCAGTAAA
GCAGTGCTCC AGCAAATCCT TGAGGCACTC CCCAGCGAAG CCCTGACCCT CGAAGTTGCG
AAAGGGCTGA TCGATCAAGC GGTCAAAGCC GCCGGTGTCA AAAAAGGCAT CGGTATGCGA
TCGCTGCGGG CAGCCCTGAT GGGTTCGATG CAGGGGCCCG ATCTGCTTAC GAGCTGGGTG
TTGCTGCATC AGGCGGGGCA AGCTCAACCG CGTCTTCAGG CTGCGATCGC GGCGGCTCAG
GGCTAG
 
Protein sequence
MSVRVRIAPS PTGNLHIGTA RTAVFNWLFA RRHQGQFILR IEDTDLERSR SEYTDNILTG 
LQWLGLNWDE GPFYQTQRLD LYKAAVQQLL DSGKAYRCYC TEAELEALRE SQRARNEAPR
YDNRHRDLTP EQEAAFQAEG REAVIRFRID DDREIAWTDL VRDRVVWKGS DLGGDMVIAR
RSPAGTIGQP LYNLAVVVDD IDMTISHVIR GEDHIANTAK QILLYEALGA AVPEFAHTPL
ILNKEGRKLS KRDGVTSISD FQNLGYLPEA IANYMTLLGW SPVEGMDERF SLAEAATVFD
FDRVNKAGAK FDWDKLNWLN SQVIKEKSAS ELVALLQPFW SKAGVDTAAY PAAWLEELAT
LLGPSLVTLT DIVGQSQLFF SQGIELQEDA IAQLGQAGSK AVLQQILEAL PSEALTLEVA
KGLIDQAVKA AGVKKGIGMR SLRAALMGSM QGPDLLTSWV LLHQAGQAQP RLQAAIAAAQ
G