Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_2382 |
Symbol | |
ID | 3774666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 2448879 |
End bp | 2450069 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637800830 |
Product | coproporphyrinogen III oxidase |
Protein accession | YP_401399 |
Protein GI | 81301191 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0342073 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAATT TGCCGATTGC TGCTTACCTA CACATCCCCT TTTGTCGTCG TCGCTGCTTT TACTGTGACT TCCCGATTAG CGTCGTGGGC GATCGCCTGC GCGGGGATCA GTCCGGCATG ATCCGCCAGT ATGTGGACGC GATCTGCCAA GAAATTGCTG CGACGCCTGT GCTTGGGCCA GCACTGCAAA CGGTCTTTTT CGGTGGGGGA ACGCCCTCCC TGCTGAGTCC CAATCAGCTC GATCGCATTC TGCAGACCCT CGATCGCCGT TTTGGGATTG CAGCGACGGC TGAAATTTCA ATCGAAATGG ATCCCGCTAG CTTTGACCGA TCGCAAGCGA TCGCAACGCG ACAGCTAGGC TTTAACCGCG TCAGTATTGG CGCTCAGGCG TTTCAAGATG GCCTGTTGGA ACGGTGTGGT CGTACCCATC GGCGGGCCGA TATCGATCGC GCTGTGGCGG ATTTGCGGGC TGCTGGTTTC GAGAATCTCA GTCTGGATTT GATCTCGGGT CTACCGGAAC AGACGCTGGC GGATTGGCAG GCTTCATTAG AAGCCGCGAT CGCCCTAGAA CCGACTCACC TCTCGGCCTA CGATCTGGTG CTAGAACCAG AGACGGTGTT TGGCAAGCGC TATCAACCGG GCGATCGCCC CTTGCCAGCC GATGAGCAAA CCGCTGTCAT GTATCGACTG GCGCATAGGA CCTTGGAAGC GGCGGGCTTT GAGCACTATG AAATCTCGAA CTATGCGCGA TCGGGATTTC AGTGTCGCCA CAATCGCGTC TACTGGCAGG ATCAGTCCTT CTATGGCTTT GGGGTCGGTG CGACGAGTGC CCTGCAAGGC CAGCGGTTTG GCCGTCCGCG CCGCCGAGCT GATTACTTTA TCTGGCTCGA GACGCCGGGT GCGATCGCGG CAGCTTGTGC ACCGGTTACC TCTGATCCGG CTGATGCCTT AGCGGAAACG CTGATGTTGG GGCTGCGGCT GGCGGAAGGG TTGGATTGGA CCGCATTAGA GCAGCCGTTT GGGGCAGAAA TCCTGCGATC GCTGCAACCT GTGATTCAGC GCTACCAACA GGCGGGCTGG TTGCAATGGC AGGGCGATCG CCTCAGCTTG ACCCAGCCGG AGGGCATGCT CTTCTCGAAT CAGGTCTTAG CCAGTTTGTT TGAACGACTC GAGGCGATCG CGACTGTCTA G
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Protein sequence | MINLPIAAYL HIPFCRRRCF YCDFPISVVG DRLRGDQSGM IRQYVDAICQ EIAATPVLGP ALQTVFFGGG TPSLLSPNQL DRILQTLDRR FGIAATAEIS IEMDPASFDR SQAIATRQLG FNRVSIGAQA FQDGLLERCG RTHRRADIDR AVADLRAAGF ENLSLDLISG LPEQTLADWQ ASLEAAIALE PTHLSAYDLV LEPETVFGKR YQPGDRPLPA DEQTAVMYRL AHRTLEAAGF EHYEISNYAR SGFQCRHNRV YWQDQSFYGF GVGATSALQG QRFGRPRRRA DYFIWLETPG AIAAACAPVT SDPADALAET LMLGLRLAEG LDWTALEQPF GAEILRSLQP VIQRYQQAGW LQWQGDRLSL TQPEGMLFSN QVLASLFERL EAIATV
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