Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_2381 |
Symbol | panB |
ID | 3774665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 2448076 |
End bp | 2448882 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637800829 |
Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
Protein accession | YP_401398 |
Protein GI | 81301190 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0307283 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGATCA CGCCTCGTCA CCTGCGTCAG TGGAAGCAAC AGGGTCGCCC GATTGTGGCG CTGACCGCTT GGGATTTTGC GATCGCCAGC ATTTTGGATG AGGCAGGCAT CGATCTGGTT CTTGTTGGCG ATTCCTTGGC AATGGTTGCC CTCGGGCATC CCACGACGCT GCCCCTAAGC CTAGAAGACA TGATTCACCA TGTGCAGGCC GTGCAGCGTG GTTGCCGCAA TGCCCTGATC GTCAGCGACT TGCCGTTTTT GTCCTACCAA ACCAGCCCAG AAGACGCGAT TCTCGCAGCA GGACAACTGC TGAAGGTGAC GGAGGCTCAA GCCGTCAAAT TAGAGGGGGG CTATCCGCGC CTCTTAGAAA CGGTGCAACG ACTGGTGGAA GTCGGCATTC CGGTGATGGG GCATGTGGGG CTGACTCCGC AATCCGTGCG CCAGCTCGGC TATCGCCAGC AGGGACAAAC GCCCGAAGCG CAGCAGCAGA TTTTGGATCA GGCTCTCGCG CTGGAGGCTG CTGGCGCGTT CGCGATCGTC TTGGAACACA TTCCCGATCG CCTTGCAGCC ATGATCACGG CGAAACTCTC GATTCCAACG ATCGGGATTG GGGCTGGCCC TAATTGTGAT GGGCAAATTT TGGTGACCGC CGATCTGCTA GGACTGACCC CTAGCCAGCC GCCCTTTGCG CCGGCTTATC TCAACCTGCG GCAAGCGATC GGATCTGCCG TGCAGCGTTA CGCCCGAGAA GTGCGCGATC GCCAGTTCCT CCAGTCTCAG CCAGCTGAAC AGGAACCACT CTCCTAG
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Protein sequence | MPITPRHLRQ WKQQGRPIVA LTAWDFAIAS ILDEAGIDLV LVGDSLAMVA LGHPTTLPLS LEDMIHHVQA VQRGCRNALI VSDLPFLSYQ TSPEDAILAA GQLLKVTEAQ AVKLEGGYPR LLETVQRLVE VGIPVMGHVG LTPQSVRQLG YRQQGQTPEA QQQILDQALA LEAAGAFAIV LEHIPDRLAA MITAKLSIPT IGIGAGPNCD GQILVTADLL GLTPSQPPFA PAYLNLRQAI GSAVQRYARE VRDRQFLQSQ PAEQEPLS
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