Gene Synpcc7942_2329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2329 
Symbol 
ID3774612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2395924 
End bp2397198 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content57% 
IMG OID637800777 
Productmetal dependent phosphohydrolase 
Protein accessionYP_401346 
Protein GI81301138 
COG category[R] General function prediction only 
COG ID[COG1078] HD superfamily phosphohydrolases 
TIGRFAM ID[TIGR01353] deoxyguanosinetriphosphate triphosphohydrolase, putative 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.751432 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTAGTC GCCGCCAGCG CATCTACCAC GATCCACTCC ACGGGGCGAT CGCCCTGCAA 
TTTGAAGACC CGCTGGAAGC AACGCTGATC CGCTTGATCG ATACGCCACC CTTTCAGCGG
CTACGGCGGA TCTGCCAGCT TGGTCCCGCC AGTTTGACCT TTCATGGAGC TGAAGCCTCT
CGCTTCACCC ATTCCCTCGG GGTGATGCAG GTTGCTCGCC GTGCCTTTGC CCCGATCGCA
GCTGATTGGC CCGAATTGGC AGTGCATCGA CCGGCGTTGC TCTGTGCGGC ACTGCTACAT
GACTTAGGCC ATACGGCCTT TAGCCACACC GGCGAGGAGA TTTTCCACTG CCAACATGAG
CAGTGGACAG CCCGGCTAAT CACTGAGGAC TCTCCGATTC GGCGGGTGCT AGCCGATTAC
GATCCGGCGC TGCCGGAGCA AGTTCTTGCG GTCTATCGCA AGCAATATCA GCCCTTGCTG
ATCAGCCGCC TGATCACCAG CCAGCTCGAT TGCGATCGCT TGGACTATCT GCTGCGCGAT
AGCTATTTCA CGGGGGCAAG TTACGGGCGT CTGGATCTCG ATCGCATTTT GTCAGCACTG
CGCTTCGACT CTGAGAGCGG CGAGTTAGCT GTGGCGGAGA AGGGATTGGC GGCGATCGAG
CACTACTTGG TGGTGCGATC GTTCATGTAT AGCCAGGTCT ACAACCATCC CAAAAACATT
GTGGCTGGCT GGATGTTAGT GCGAATTTTT GAGCGGGCCC GTCAGCTCTG GCAGGAACAA
CCGCGATCGC TGTTTGTGGA TCCGCTGCTC CAGCCTTGGT TTGAGCAACC CGTCACGGAT
CTGAGCTTGG AGGAATACCT AGCGGTCGAC GACATTGTCT GCCTCTACCA TCTGCAGCGT
TGGCAGGACA GTGCTGATCC CCTCTTGGCC GATCTCTGCC GCCGCTACCG CGATCGCGAT
CTGCTTAAAG CCCTCAATCT CCGTAACCTC CCTGCTGAGC AGCAGCAGAC CTTACTAGAG
CACAGTCAAC AATTGATTCG TAACCAAGGA CAGGATCCGA CTGGCTATAC CGGCCTTTGC
CAGACCCAAA GTCGTGGCTA CACCCTCTAC CAAAGTGGGA TTCGCCTCGC CACCGATCAA
GGATTATTGG AAATTAGTCA GCGATCGCCC CTGATTCGTG CCCTGTTGGA GCCACCTAGC
CAAGCTTGGT TGATCTATCC GCGAGTGATC GAACAGCCCC TCAAGCAGCA ATGGCAGCTC
GTCCGAGGCA GCTAA
 
Protein sequence
MPSRRQRIYH DPLHGAIALQ FEDPLEATLI RLIDTPPFQR LRRICQLGPA SLTFHGAEAS 
RFTHSLGVMQ VARRAFAPIA ADWPELAVHR PALLCAALLH DLGHTAFSHT GEEIFHCQHE
QWTARLITED SPIRRVLADY DPALPEQVLA VYRKQYQPLL ISRLITSQLD CDRLDYLLRD
SYFTGASYGR LDLDRILSAL RFDSESGELA VAEKGLAAIE HYLVVRSFMY SQVYNHPKNI
VAGWMLVRIF ERARQLWQEQ PRSLFVDPLL QPWFEQPVTD LSLEEYLAVD DIVCLYHLQR
WQDSADPLLA DLCRRYRDRD LLKALNLRNL PAEQQQTLLE HSQQLIRNQG QDPTGYTGLC
QTQSRGYTLY QSGIRLATDQ GLLEISQRSP LIRALLEPPS QAWLIYPRVI EQPLKQQWQL
VRGS