Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_2238 |
Symbol | |
ID | 3773894 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 2303629 |
End bp | 2305044 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637800685 |
Product | glucose transport protein |
Protein accession | YP_401255 |
Protein GI | 81301047 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.154375 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTCCT CCATTGCCAA AAGTGTTCAG AGCCATATTG ATGAAACGCC TCCCCGTCCT CTGAGCTCCA TGCAGTGGCA AATCTGGAGT TTGGCCGCGA TGGGGAAGCT ATTTGAAGGC ATGGTGATTT TTATTACCGG TGTAGCTGTT CCATTGATTG AAAGAGACTT TAATCTCTCT TCTGCACTCA AGGGCTCTGT TGCGGCGGCA TCTTTGTTGG GAATCTTGAT TGGAGCTTCC CTGTTTGGCA ACTTGGCCGA TCGCTATGGG CGAAAGTTTG TCTTCGTCAT TGAGATGGCA ATTTTTACAA TTGCGATCGC CCTATCCGCT GTAGCTTGGA ATGTCTCGGC TTTAATTTTC TTTCTGTTTT GTAGTGGCTT GGCCCTAGGG GCCGATTATC CTATTGCCCA TATTATTGTG TCTGAATCAA TTCCCAGCCG ATTTCGTGGC CGGATGGTAT TGGGAGCCTT TGCCTTTCAA TCTGTGGGAT CTCTGGCTGG TGTATTGATT GGCCTACTGG TTTTGCGAAT TTATCCAGAA GTAGGTGCTT GGCACTGGAT GTATGCAGCT CTTGTGATTC CAAGTATCCT TGTCTTCCTG ATGAGAACTA AACTACCAGA AAGTCCTCAC TGGTTGGTCT CTCGCAAACA GTTTGAACTC GCTCATCGGG CGGCTAAAGC ATTGCTGCAA CGGCCTGTAG CGATCGCTCA GAATGATTCC GATGGGGAGC GGCAAAATCC CCGACTCGGC TACAGAAAAT TATTGACGCC TCGATACCTA AGAGCGACAG TTCTTACTGC TGTTCCTTGG TTTCTTCAGG ATCTAGCAAC CTATGGAATT GGAATTTTTA CACCTACGAT ATTGGCAACA TTATTCACAA AAGCTCAGCC TAACTTTGTC TTTCAAGACA TGATTGCCAC AGAAGGTTCA GGCCTTATCG ATCTATTCTT GCTTGTGGGC TTTGCTGCTT CTATCCCGTT GGTTGACAAA TTTGGGCGTA TCCCCCTGCA GATCATTGGC TTTATTGGCT GTTCGGTTGG ACTCATCATT GCTTCTCTGT CGGCAGTGAG CATCCCAGAA AGTCATGAGC TGAGGATTCT CTTCATTTTT GGTGGATTTA TTCTTTTCAA CTTCATGACT AATTTGGGGC CGAACGCAAT GACCTACGTT TTGTCAGGGG AAGTATTCCC TACAGAAATA CGAGGTGTCG GAGCGGGCTT TGCTGCTTCT TTTGCCAAGA TTGGTGCGGT TGCCACAGCC TTCTTCTTCC CAATCCTGCG TGAGCAAATT GGAACAGTTG CTCTGCTGTG TGGTTTGGCT GTCACATCGC TCTTGGGTGC GCTGGTAACA TTTCTCTTTC GAATTGAGCC CAATGGCCAC AGTCTTGAAG AATTAAGCGA GAAGCCTCTT GTTTAG
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Protein sequence | MSSSIAKSVQ SHIDETPPRP LSSMQWQIWS LAAMGKLFEG MVIFITGVAV PLIERDFNLS SALKGSVAAA SLLGILIGAS LFGNLADRYG RKFVFVIEMA IFTIAIALSA VAWNVSALIF FLFCSGLALG ADYPIAHIIV SESIPSRFRG RMVLGAFAFQ SVGSLAGVLI GLLVLRIYPE VGAWHWMYAA LVIPSILVFL MRTKLPESPH WLVSRKQFEL AHRAAKALLQ RPVAIAQNDS DGERQNPRLG YRKLLTPRYL RATVLTAVPW FLQDLATYGI GIFTPTILAT LFTKAQPNFV FQDMIATEGS GLIDLFLLVG FAASIPLVDK FGRIPLQIIG FIGCSVGLII ASLSAVSIPE SHELRILFIF GGFILFNFMT NLGPNAMTYV LSGEVFPTEI RGVGAGFAAS FAKIGAVATA FFFPILREQI GTVALLCGLA VTSLLGALVT FLFRIEPNGH SLEELSEKPL V
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