| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2052 |
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| Symbol | |
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| ID | 3774271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 2129314 |
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| End bp | 2130186 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637800497 |
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| Product | oligopeptides ABC transporter permease protein |
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| Protein accession | YP_401069 |
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| Protein GI | 81300861 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACTTG CAGTGCTGGA TCGCTTGCGT CTGCCCGGCT TTACCGGCGC TACTTTTGCG
GCGCGGCTGG CGCGGTGGGG ACTGGGCATC AGCCTGATCT ACGTACTGAT TGCGATCGCG
GCACCACTCT TGCAGGCTTG GGGCTGGCTC CAAAATCCGA CGGAAGCGTT GCTCAATCCC
ATCCATGCCG CGCCCTCTTG GCAGCATTGG TTTGGCACAA CGCGGCAGGG CTATGACGTC
TTTTCACGGA CGCTGTTTGG GACGCGAGTC GCTCTGCAGG TCGTTTTGCT GGGAACGAGT
TTGAGTTTGG TGATCGGGGT GCCACTGGGC TTGATTGCCG GTTACTGGGG CGGTTGGCTC
GATCGCGCCC TGGTTTTTTT GATGGACGTA ATCTACACGC TGCCCGGCCT GCTGCTGTCG
ATCACGTTGG CTTTTGTGGT GGGACGCGGC GTGCCCAATG CAGCGATCGC CCTCAGCATT
GCCTACGTGC CGCAGTACTT TCGAGTCGTG CGCAACCAAA CGGCGAGTGT CAAAAGCGAA
CCCTACATCG AGGCGGCGCG ATCGCTGGGG GCTTCGACCC CGCACATTTT GCGCAAGTAC
TTGGTCGCCA ACGTCATCCA AAGCGTGCCG GTGCTATTCA CCTTGAACGC AGCCGATGCC
GTCTTGATTC TGGGTGGTTT GGGCTTTCTG GGCTTAGGTC TACCGGAGGC AGTTCCCGAG
TGGGGCTACG ACCTACGGCA GGCACTGGAC GCTCTGCCTA CAGGCATTTG GTGGACGGCG
CTCTTTCCGG GCTTGGCGAT GACTCTGCTC GTCGTGGCGC TGTCGCTGCT AGGCGAAGGC
CTGGGTGAAA CCCTGCAACC CAAGCGGCGC TAG
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| Protein sequence | MQLAVLDRLR LPGFTGATFA ARLARWGLGI SLIYVLIAIA APLLQAWGWL QNPTEALLNP
IHAAPSWQHW FGTTRQGYDV FSRTLFGTRV ALQVVLLGTS LSLVIGVPLG LIAGYWGGWL
DRALVFLMDV IYTLPGLLLS ITLAFVVGRG VPNAAIALSI AYVPQYFRVV RNQTASVKSE
PYIEAARSLG ASTPHILRKY LVANVIQSVP VLFTLNAADA VLILGGLGFL GLGLPEAVPE
WGYDLRQALD ALPTGIWWTA LFPGLAMTLL VVALSLLGEG LGETLQPKRR
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