| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2040 |
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| Symbol | |
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| ID | 3774259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 2109423 |
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| End bp | 2110133 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637800485 |
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| Product | sugar fermentation stimulation protein A |
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| Protein accession | YP_401057 |
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| Protein GI | 81300849 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1489] DNA-binding protein, stimulates sugar fermentation |
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| TIGRFAM ID | [TIGR00230] sugar fermentation stimulation protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.619365 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCAGC GGCTCTATAC CTATCCCCCT CTGTTGCGGG GGCGCTTGCT CCAGCGCTAC
AAACGCTTTT TTGCTGATAT TGAACTCGAC AGTGGCGAGA CGATCACGGC TCACTGCCCG
AACACGGGGC CAATGACGGG CGTTTGTCAG ATGGGCAATC TGGTTTATGT CTCTAAATCA
GACAATCCCA AACGGAAGTT GGCCTACACC TGGGAACTGA TTGAGGTCAC GGATAACGAA
CCGACTTGGG TGGGTGTCAA TACGGGGCTA CCGAATCGGG TGGTTCAAGC CCTGCTCGAG
CAGCGTTGCT TGCCGGTGTT GGGCGACTAT GGCGAGGTGC AGCGCGAGGT CCCGTATGGC
GAGAACAGTC GGATTGATTT CCGATTAACG GGCGATCGCC CCATCTATGT CGAGGTGAAA
AATACGACTT GGACGGCTGG TCGCCTCGCG CTTTTCCCAG ATACCGTCAC GACTCGCGGC
CAGAAGCACT TGCGGGAGCT GACAGCGATT TTGCTGGAAG CGCGAGCGGT CATGCTCTAC
TTCATCAATC GGGGCGATTG CACTGCTTTC GCGCCGGGAG ATAGCGCCGA CCCAACCTAT
GGGCAGCTGT TGCGGACTGG CATTGCTGCC GGTCTTGAAG TCTATCCCTG CCAATTTCAG
ATCAGTCCTG AAGGCATTGA TTTTCTAGGC GTTGCCCCTT TGCAACTCTA A
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| Protein sequence | MPQRLYTYPP LLRGRLLQRY KRFFADIELD SGETITAHCP NTGPMTGVCQ MGNLVYVSKS
DNPKRKLAYT WELIEVTDNE PTWVGVNTGL PNRVVQALLE QRCLPVLGDY GEVQREVPYG
ENSRIDFRLT GDRPIYVEVK NTTWTAGRLA LFPDTVTTRG QKHLRELTAI LLEARAVMLY
FINRGDCTAF APGDSADPTY GQLLRTGIAA GLEVYPCQFQ ISPEGIDFLG VAPLQL
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